| MMDBm0000015 | Akkermansia muciniphila ATCC BAA-835 | Bacteria | Verrucomicrobia | Human | Metabolic reconstruction | VMH |
| MMDBm0156399 | Ustilago maydis 521 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0148853 | Cryptococcus neoformans var. neoformans B-3501A | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0148857 | Cryptococcus neoformans var. neoformans JEC21 | Fungi | Basidiomycota | Not Available | Not Available | RHEA |
| MMDBm0810479 | Peptoniphilus indolicus ATCC 29427 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0810781 | Kallipyga massiliensis ph2 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002706 | Thermosipho melanesiensis BI429 | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0002358 | Petrotoga mobilis SJ95 | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0001963 | Thermotoga maritima MSB8 | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0001613 | Fervidobacterium nodosum Rt17-B1 | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0002711 | Thermotoga lettingae TMO | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0002707 | Thermosipho africanus TCF52B | Bacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0002641 | Sulfolobus solfataricus P2 | Archaea | Crenarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0881917 | Methanomassiliicoccus luminyensis B10 | Archaea | Euryarchaeota | Not Available | Metabolic reconstruction | VMH |
| MMDBm0002701 | Thermoplasma acidophilum DSM 1728 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002702 | Thermoplasma volcanium GSS1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001955 | Picrophilus torridus DSM 9790 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002699 | Thermomicrobium roseum DSM 5159 | Bacteria | Chloroflexi | Not Available | Not Available | RHEA |
| MMDBm0002424 | Pyrococcus horikoshii OT3 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002693 | Thermococcus sibiricus MM 739 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002691 | Thermococcus onnurineus NA1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002692 | Thermococcus gammatolerans EJ3 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002423 | Pyrococcus abyssi GE5 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002690 | Thermococcus kodakarensis KOD1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002425 | Pyrococcus furiosus DSM 3638 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
