| MMDBm0001954 | Pyrobaculum aerophilum str. IM2 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001709 | Hyperthermus butylicus DSM 5456 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002701 | Thermoplasma acidophilum DSM 1728 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002423 | Pyrococcus abyssi GE5 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002424 | Pyrococcus horikoshii OT3 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002690 | Thermococcus kodakarensis KOD1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001974 | Leptospira interrogans serovar Lai str. 56601 | Bacteria | Spirochaetes | Not Available | Not Available | RHEA |
| MMDBm0002448 | Rhodopirellula baltica SH 1 | Bacteria | Planctomycetes | Not Available | Not Available | RHEA |
| MMDBm0001838 | Methanopyrus kandleri AV19 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001848 | Methanospirillum hungatei JF-1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001843 | Methanosarcina acetivorans C2A | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001818 | Methanocaldococcus jannaschii DSM 2661 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001849 | Methanothermobacter thermautotrophicus str. Delta H | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001672 | Halobacterium salinarum R1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001652 | Gloeobacter violaceus PCC 7421 | Bacteria | Cyanobacteria | Not Available | Not Available | RHEA |
| MMDBm0001323 | Buchnera aphidicola str. Sg (Schizaphis graminum) | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0000160 | Escherichia coli | Bacteria | Proteobacteria | Human | Unknown | ECMDB |
| MMDBm0542442 | Escherichia coli O157:H7 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0000368 | Shigella flexneri | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001658 | Haemophilus influenzae Rd KW20 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001616 | Flavobacterium psychrophilum JIP02/86 | Bacteria | Bacteroidetes | Not Available | Not Available | RHEA |
| MMDBm0001686 | Helicobacter pylori J99 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001685 | Helicobacter pylori 26695 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001367 | Campylobacter jejuni subsp. jejuni NCTC 11168 | Bacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001547 | Desulfovibrio vulgaris str. Hildenborough | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
