| MMDBm0101577 | Schizosaccharomyces pombe 972h- | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0001681 | Halorubrum lacusprofundi ATCC 49239 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002642 | Sulfolobus tokodaii str. 7 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002643 | Sulfolobus acidocaldarius DSM 639 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001669 | Haloarcula marismortui ATCC 43049 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002648 | Sulfolobus islandicus M.16.27 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001672 | Halobacterium salinarum R1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001926 | Natronomonas pharaonis DSM 2160 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001813 | Metallosphaera sedula DSM 5348 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002649 | Sulfolobus islandicus M.16.4 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001671 | Halobacterium sp. NRC-1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002644 | Sulfolobus islandicus M.14.25 | Archaea | Crenarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002380 | Prochlorococcus marinus str. MIT 9301 | Bacteria | Cyanobacteria | Not Available | Not Available | RHEA |
| MMDBm0572837 | Acinetobacter junii SH205 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000222 | Ochrobactrum intermedium LMG 3301 | Bacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0730186 | Bacillus thuringiensis serovar thuringiensis str. T01001 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0792746 | Lactobacillus mucosae LM1 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0786739 | Enterococcus avium ATCC 14025 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001981 | Bdellovibrio bacteriovorus HD100 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0796207 | Streptococcus thoraltensis DSM 12221 | Bacteria | Firmicutes | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002405 | Pseudomonas putida GB-1 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001977 | Nitrosomonas europaea ATCC 19718 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002765 | Xanthomonas oryzae pv. oryzae MAFF 311018 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0639412 | Schlesneria paludicola DSM 18645 | Bacteria | Planctomycetes | Human Feces | Metabolic reconstruction | VMH |
