MiMeDB: Showing metabocard for (2E)-eicosenoyl-CoA (MMDBc0047856)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2021-11-19 15:46:13 UTC

Update Date

2022-09-01 02:00:12 UTC

Metabolite ID

MMDBc0047856

Metabolite Identification

Common Name

(2E)-eicosenoyl-CoA

Description

Structure

MOL SDF PDB SMILES InChI


  Mrv1572012221508192D          

 76 78  0  0  0  0            999 V2000
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M  CHG  4  49  -1  53  -1  54  -1  55  -1
M  END


  Mrv1572012221508192D          

 76 78  0  0  0  0            999 V2000
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 41  3  1  0  0  0  0
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 41 36  1  0  0  0  0
 42 37  1  0  0  0  0
 43 24  1  4  0  0  0
 43 31  2  0  0  0  0
 44 23  1  4  0  0  0
 44 39  2  0  0  0  0
 45 28  2  0  0  0  0
 45 37  1  0  0  0  0
 46 28  1  0  0  0  0
 46 38  2  0  0  0  0
 47 29  2  0  0  0  0
 47 33  1  0  0  0  0
 48 29  1  0  0  0  0
 48 38  1  0  0  0  0
 40 48  1  1  0  0  0
 49 31  1  0  0  0  0
 50 32  2  0  0  0  0
 34 51  1  6  0  0  0
 36 52  1  6  0  0  0
 53 39  1  0  0  0  0
 61 26  1  0  0  0  0
 62 27  1  0  0  0  0
 63 30  1  0  0  0  0
 63 40  1  0  0  0  0
 35 64  1  1  0  0  0
 66 54  1  0  0  0  0
 66 55  1  0  0  0  0
 66 56  2  0  0  0  0
 66 64  1  0  0  0  0
 67 57  1  0  0  0  0
 67 58  2  0  0  0  0
 67 61  1  0  0  0  0
 67 65  1  0  0  0  0
 68 59  1  0  0  0  0
 68 60  2  0  0  0  0
 68 62  1  0  0  0  0
 68 65  1  0  0  0  0
 69 25  1  0  0  0  0
 69 32  1  0  0  0  0
 70 20  1  0  0  0  0
 71 21  1  0  0  0  0
 30 72  1  6  0  0  0
 34 73  1  1  0  0  0
 35 74  1  1  0  0  0
 36 75  1  6  0  0  0
 40 76  1  6  0  0  0
M  CHG  4  49  -1  53  -1  54  -1  55  -1
M  END
> <DATABASE_ID>
MMDBc0047856

> <DATABASE_NAME>
MIME

> <SMILES>
[H]\C(CCCCCCCCCCCCCCCCC)=C(\[H])C(=O)SCCN=C([O-])CCN=C([O-])[C@]([H])(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@@]1([H])O[C@@]([H])(N2C=NC3=C(N)N=CN=C23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O

> <INCHI_IDENTIFIER>
InChI=1S/C41H72N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-32(50)69-25-24-43-31(49)22-23-44-39(53)36(52)41(2,3)27-62-68(59,60)65-67(57,58)61-26-30-35(64-66(54,55)56)34(51)40(63-30)48-29-47-33-37(42)45-28-46-38(33)48/h20-21,28-30,34-36,40,51-52H,4-19,22-27H2,1-3H3,(H,43,49)(H,44,53)(H,57,58)(H,59,60)(H2,42,45,46)(H2,54,55,56)/p-4/b21-20+/t30-,34-,35-,36+,40-/m1/s1

> <INCHI_KEY>
ROOFWBIMBMJYGA-DSAUMYHJSA-J

> <FORMULA>
C41H68N7O17P3S

> <MOLECULAR_WEIGHT>
1056.01

> <EXACT_MASS>
1055.362720245

> <JCHEM_ACCEPTOR_COUNT>
19

> <JCHEM_ATOM_COUNT>
137

> <JCHEM_AVERAGE_POLARIZABILITY>
107.78393740248691

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
-4

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-2-hydroxy-N-[2-({2-[(2E)-icos-2-enoylsulfanyl]ethyl}carboximidato)ethyl]-3,3-dimethylbutanecarboximidate

> <ALOGPS_LOGP>
4.61

> <JCHEM_LOGP>
1.8446971303221082

> <ALOGPS_LOGS>
-3.98

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-4

> <JCHEM_PKA>
1.8896342747149428

> <JCHEM_PKA_STRONGEST_ACIDIC>
0.8194563938669224

> <JCHEM_PKA_STRONGEST_BASIC>
6.426978816180786

> <JCHEM_POLAR_SURFACE_AREA>
381.9300000000001

> <JCHEM_REFRACTIVITY>
276.0458000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
37

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.17e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-4-[({[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methoxy(hydroxy)phosphoryl}oxy(hydroxy)phosphoryl)oxy]-2-hydroxy-N-[2-({2-[(2E)-icos-2-enoylsulfanyl]ethyl}carboximidato)ethyl]-3,3-dimethylbutanecarboximidate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 22-DEC-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   22-DEC-15         0                                  
HETATM    1  C   UNK     0     -25.313  -8.639   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      14.904  -6.329   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      11.824  -6.329   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0     -23.979  -7.869   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0     -22.645  -8.639   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0     -21.312  -7.869   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0     -19.978  -8.639   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0     -18.644  -7.869   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0     -17.310  -8.639   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0     -15.977  -7.869   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0     -14.643  -8.639   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0     -13.309  -7.869   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0     -11.976  -8.639   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0     -10.642  -7.869   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -9.308  -8.639   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -7.975  -7.869   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -6.641  -8.639   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -5.307  -7.869   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.974  -8.639   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -2.640  -7.869   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.306  -8.639   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.029  -7.869   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       9.363  -8.639   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       4.028  -8.639   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.695  -7.869   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      17.365   2.141   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      13.364  -4.789   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      25.151   6.211   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      20.222   7.503   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      18.699   2.911   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       6.696  -8.639   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       0.027  -7.869   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      22.660   8.021   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      21.136   3.429   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      20.106   2.284   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      13.364  -7.869   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      24.067   8.648   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      22.499   6.489   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      12.030  -8.639   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      20.366   4.762   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      13.364  -6.329   0.000  0.00  0.00           C+0
HETATM   42  N   UNK     0      24.228  10.179   0.000  0.00  0.00           N+0
HETATM   43  N   UNK     0       5.362  -7.869   0.000  0.00  0.00           N+0
HETATM   44  N   UNK     0      10.697  -7.869   0.000  0.00  0.00           N+0
HETATM   45  N   UNK     0      25.313   7.742   0.000  0.00  0.00           N+0
HETATM   46  N   UNK     0      23.745   5.584   0.000  0.00  0.00           N+0
HETATM   47  N   UNK     0      21.253   8.648   0.000  0.00  0.00           N+0
HETATM   48  N   UNK     0      20.992   6.169   0.000  0.00  0.00           N+0
HETATM   49  O   UNK     0       6.696 -10.179   0.000  0.00  0.00           O-1
HETATM   50  O   UNK     0       0.027  -6.329   0.000  0.00  0.00           O+0
HETATM   51  O   UNK     0      22.668   3.268   0.000  0.00  0.00           O+0
HETATM   52  O   UNK     0      14.698  -8.639   0.000  0.00  0.00           O+0
HETATM   53  O   UNK     0      12.030 -10.179   0.000  0.00  0.00           O-1
HETATM   54  O   UNK     0      18.251   0.892   0.000  0.00  0.00           O-1
HETATM   55  O   UNK     0      20.312  -1.397   0.000  0.00  0.00           O-1
HETATM   56  O   UNK     0      18.137  -1.283   0.000  0.00  0.00           O+0
HETATM   57  O   UNK     0      16.801  -1.503   0.000  0.00  0.00           O+0
HETATM   58  O   UNK     0      15.261   1.164   0.000  0.00  0.00           O+0
HETATM   59  O   UNK     0      16.238  -2.479   0.000  0.00  0.00           O+0
HETATM   60  O   UNK     0      13.158  -2.479   0.000  0.00  0.00           O+0
HETATM   61  O   UNK     0      17.365   0.601   0.000  0.00  0.00           O+0
HETATM   62  O   UNK     0      14.698  -4.019   0.000  0.00  0.00           O+0
HETATM   63  O   UNK     0      18.860   4.442   0.000  0.00  0.00           O+0
HETATM   64  O   UNK     0      20.426   0.778   0.000  0.00  0.00           O+0
HETATM   65  O   UNK     0      14.698  -0.939   0.000  0.00  0.00           O+0
HETATM   66  P   UNK     0      19.281  -0.252   0.000  0.00  0.00           P+0
HETATM   67  P   UNK     0      16.031  -0.169   0.000  0.00  0.00           P+0
HETATM   68  P   UNK     0      14.698  -2.479   0.000  0.00  0.00           P+0
HETATM   69  S   UNK     0       1.361  -8.639   0.000  0.00  0.00           S+0
HETATM   70  H   UNK     0      -2.640  -6.329   0.000  0.00  0.00           H+0
HETATM   71  H   UNK     0      -1.306 -10.179   0.000  0.00  0.00           H+0
HETATM   72  H   UNK     0      18.779   1.373   0.000  0.00  0.00           H+0
HETATM   73  H   UNK     0      21.688   1.991   0.000  0.00  0.00           H+0
HETATM   74  H   UNK     0      19.785   3.791   0.000  0.00  0.00           H+0
HETATM   75  H   UNK     0      12.030  -7.099   0.000  0.00  0.00           H+0
HETATM   76  H   UNK     0      21.904   4.843   0.000  0.00  0.00           H+0
CONECT    1    4                                                            
CONECT    2   41                                                            
CONECT    3   41                                                            
CONECT    4    1    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   70                                                  
CONECT   21   20   32   71                                                  
CONECT   22   23   31                                                       
CONECT   23   22   44                                                       
CONECT   24   25   43                                                       
CONECT   25   24   69                                                       
CONECT   26   30   61                                                       
CONECT   27   41   62                                                       
CONECT   28   45   46                                                       
CONECT   29   47   48                                                       
CONECT   30   26   35   63   72                                             
CONECT   31   22   43   49                                                  
CONECT   32   21   50   69                                                  
CONECT   33   37   38   47                                                  
CONECT   34   35   40   51   73                                             
CONECT   35   30   34   64   74                                             
CONECT   36   39   41   52   75                                             
CONECT   37   33   42   45                                                  
CONECT   38   33   46   48                                                  
CONECT   39   36   44   53                                                  
CONECT   40   34   48   63   76                                             
CONECT   41    2    3   27   36                                             
CONECT   42   37                                                            
CONECT   43   24   31                                                       
CONECT   44   23   39                                                       
CONECT   45   28   37                                                       
CONECT   46   28   38                                                       
CONECT   47   29   33                                                       
CONECT   48   29   38   40                                                  
CONECT   49   31                                                            
CONECT   50   32                                                            
CONECT   51   34                                                            
CONECT   52   36                                                            
CONECT   53   39                                                            
CONECT   54   66                                                            
CONECT   55   66                                                            
CONECT   56   66                                                            
CONECT   57   67                                                            
CONECT   58   67                                                            
CONECT   59   68                                                            
CONECT   60   68                                                            
CONECT   61   26   67                                                       
CONECT   62   27   68                                                       
CONECT   63   30   40                                                       
CONECT   64   35   66                                                       
CONECT   65   67   68                                                       
CONECT   66   54   55   56   64                                             
CONECT   67   57   58   61   65                                             
CONECT   68   59   60   62   65                                             
CONECT   69   25   32                                                       
CONECT   70   20                                                            
CONECT   71   21                                                            
CONECT   72   30                                                            
CONECT   73   34                                                            
CONECT   74   35                                                            
CONECT   75   36                                                            
CONECT   76   40                                                            
MASTER        0    0    0    0    0    0    0    0   76    0  156    0
END

Synonyms

Value	Source
(2E)-Eicosenoyl-CoA	ChEBI
(e)-2-Eicosenoyl-CoA(4-)	ChEBI
(e)-2-Eicosenoyl-coenzyme A(4-)	ChEBI
(e)-2-Icosenoyl-CoA(4-)	ChEBI
(e)-2-Icosenoyl-coenzyme A(4-)	ChEBI
trans-2-Eicosenoyl-CoA(4-)	ChEBI
trans-2-Eicosenoyl-coenzyme A(4-)	ChEBI
trans-2-Icosenoyl-coenzyme A(4-)	ChEBI
[(2R,3S,4R,5R)-5-(6-Aminopurin-9-yl)-4-hydroxy-2-[[[[(3R)-3-hydroxy-4-[[3-[2-[(e)-icos-2-enoyl]sulfanylethylamino]-3-oxopropyl]amino]-2,2-dimethyl-4-oxobutoxy]-oxidophosphoryl]oxy-oxidophosphoryl]oxymethyl]oxolan-3-yl] phosphoric acid	Generator
[(2R,3S,4R,5R)-5-(6-Aminopurin-9-yl)-4-hydroxy-2-[[[[(3R)-3-hydroxy-4-[[3-[2-[(e)-icos-2-enoyl]sulphanylethylamino]-3-oxopropyl]amino]-2,2-dimethyl-4-oxobutoxy]-oxidophosphoryl]oxy-oxidophosphoryl]oxymethyl]oxolan-3-yl] phosphate	Generator
[(2R,3S,4R,5R)-5-(6-Aminopurin-9-yl)-4-hydroxy-2-[[[[(3R)-3-hydroxy-4-[[3-[2-[(e)-icos-2-enoyl]sulphanylethylamino]-3-oxopropyl]amino]-2,2-dimethyl-4-oxobutoxy]-oxidophosphoryl]oxy-oxidophosphoryl]oxymethyl]oxolan-3-yl] phosphoric acid	Generator

Molecular Formula

C₄₁H₆₈N₇O₁₇P₃S

Average Mass

1056.01

Monoisotopic Mass

1055.362720245

IUPAC Name

(2R)-4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-2-hydroxy-N-[2-({2-[(2E)-icos-2-enoylsulfanyl]ethyl}carboximidato)ethyl]-3,3-dimethylbutanecarboximidate

Traditional Name

(2R)-4-[({[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methoxy(hydroxy)phosphoryl}oxy(hydroxy)phosphoryl)oxy]-2-hydroxy-N-[2-({2-[(2E)-icos-2-enoylsulfanyl]ethyl}carboximidato)ethyl]-3,3-dimethylbutanecarboximidate

CAS Registry Number

Not Available

SMILES

[H]\C(CCCCCCCCCCCCCCCCC)=C(\[H])C(=O)SCCN=C([O-])CCN=C([O-])[C@]([H])(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@@]1([H])O[C@@]([H])(N2C=NC3=C(N)N=CN=C23)[C@]([H])(O)[C@]1([H])OP([O-])([O-])=O

InChI Identifier

InChI=1S/C41H72N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-32(50)69-25-24-43-31(49)22-23-44-39(53)36(52)41(2,3)27-62-68(59,60)65-67(57,58)61-26-30-35(64-66(54,55)56)34(51)40(63-30)48-29-47-33-37(42)45-28-46-38(33)48/h20-21,28-30,34-36,40,51-52H,4-19,22-27H2,1-3H3,(H,43,49)(H,44,53)(H,57,58)(H,59,60)(H2,42,45,46)(H2,54,55,56)/p-4/b21-20+/t30-,34-,35-,36+,40-/m1/s1

InChI Key

ROOFWBIMBMJYGA-DSAUMYHJSA-J

Chemical Taxonomy

Description

This compound belongs to the class of organic compounds known as long-chain 2-enoyl coas. These are organic compounds containing a coenzyme A substructure linked to a long-chain 2-enoyl chain of 13 to 21 carbon atoms.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl thioesters

Direct Parent

Long-chain 2-enoyl CoAs

Alternative Parents

Substituents

Coenzyme a or derivatives
Purine ribonucleoside 3',5'-bisphosphate
Purine ribonucleoside bisphosphate
Purine ribonucleoside diphosphate
Pentose phosphate
Ribonucleoside 3'-phosphate
Pentose-5-phosphate
Beta amino acid or derivatives
Glycosyl compound
N-glycosyl compound
Organic pyrophosphate
Monosaccharide phosphate
6-aminopurine
Imidazopyrimidine
Purine
Aminopyrimidine
Organic phosphoric acid derivative
Monosaccharide
Imidolactam
N-acyl-amine
Fatty amide
Phosphoric acid ester
Alkyl phosphate
N-substituted imidazole
Pyrimidine
Heteroaromatic compound
Azole
Oxolane
Imidazole
Thiocarboxylic acid ester
Amino acid or derivatives
Carboxamide group
Carbothioic s-ester
Secondary alcohol
Secondary carboxylic acid amide
Azacycle
Organoheterocyclic compound
Sulfenyl compound
Thiocarboxylic acid or derivatives
Oxacycle
Carboxylic acid derivative
Organic oxide
Organic nitrogen compound
Primary amine
Carbonyl group
Hydrocarbon derivative
Alcohol
Amine
Organic oxygen compound
Organosulfur compound
Organooxygen compound
Organonitrogen compound
Organic anion
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

2,3-trans-enoyl CoA(4-) (CHEBI:74691 )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	0.12 g/L	ALOGPS
logP	4.61	ALOGPS
logP	1.84	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Acidic)	0.82	ChemAxon
pKa (Strongest Basic)	6.43	ChemAxon
Physiological Charge	-4	ChemAxon
Hydrogen Acceptor Count	19	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	381.93 Å²	ChemAxon
Rotatable Bond Count	37	ChemAxon
Refractivity	276.05 m³·mol⁻¹	ChemAxon
Polarizability	107.78 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-0bt9-9000000200-c1da872cb95196efa176	2016-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-01ot-9000010000-ecd721e452a10ee54ec9	2016-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-0006-9731500100-d5c01d846d7ee857e7b5	2016-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-0udi-9000000000-57273387186971caf2ea	2016-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-0i00-9060010000-3d76f257474887d213d2	2016-09-14	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-01u1-9500000000-8ceef47bebba01f8dd9b	2016-09-14	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Feces

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0003844	3-hydroxyicosanoyl-CoA	(2E)-eicosenoyl-CoA	Not Available	RE0567C	VMH	10479480
MMDBr0003845	(2E)-eicosenoyl-CoA	Eicosanoyl-CoA	Ribosomal protein l14	RE0568C	VMH	10479480
MMDBr0010023	Eicosanoyl-CoA	(2E)-eicosenoyl-CoA	Acyl-coa oxidase 1, palmitoyl	Acyl Coenzyme A Oxidase	VMH	30371894
MMDBr0010024	(2E)-eicosenoyl-CoA	3-hydroxyicosanoyl-CoA	Enoyl-coa, hydratase/3-hydroxyacyl coa dehydrogenase	Enoyl Coenzyme A Hydratase	VMH	30371894
MMDBr0010044	Eicosanoyl-CoA	(2E)-eicosenoyl-CoA	Acyl-coa dehydrogenase family, member 9	Medium-Chain Acyl Coenzyme A Dehydrogenase	VMH	30371894
MMDBr0010045	(2E)-eicosenoyl-CoA	3-hydroxyicosanoyl-CoA	Enoyl coa hydratase, short chain, 1, mitochondrial	Enoyl Coenzyme A Hydratase	VMH	30371894
MMDBr0015673	(3R)-3-hydroxy-arachidoyl-CoA	(2E)-eicosenoyl-CoA	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PHS1	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0015674	(3R)-3-hydroxy-arachidoyl-CoA	(2E)-eicosenoyl-CoA	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PHS1	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0015675	(2E)-eicosenoyl-CoA	Eicosanoyl-CoA	Very-long-chain enoyl-CoA reductase	Reduction	RHEA	34755880
MMDBr0015676	(2E)-eicosenoyl-CoA	Eicosanoyl-CoA	Very-long-chain enoyl-CoA reductase	Reduction	RHEA	34755880
MMDBr0016228	(2E)-eicosenoyl-CoA	Eicosanoyl-CoA	Enoyl-[acyl-carrier-protein] reductase [NADH]	Reduction	RHEA	34755880
MMDBr0016229	(2E)-eicosenoyl-CoA	Eicosanoyl-CoA	Enoyl-[acyl-carrier-protein] reductase [NADH]	Reduction	RHEA	34755880
MMDBr0019521	(3R)-3-hydroxy-arachidoyl-CoA	Water	Peroxisomal hydratase-dehydrogenase-epimerase	Dehydrogenation	PathBank	31602464
MMDBr0019522	Hydrogen Ion	NADP	Enoyl-[acyl-carrier-protein] reductase, mitochondrial	Reduction	PathBank	31602464
MMDBr0038818	(2E)-eicosenoyl-CoA	(2E)-Eicosenoic acid	Thioesterase TesA	Hydrolysis	RHEA	34755880

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Eukaryota/Fungi	Ascomycota	2	Human feces; Human saliva	Unknown
Bacteria	Actinobacteria	1	Human

Exposure Sources

Source Type	Source Sub-type	Species	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference
Human Feces	Detected but not Quantified									HMDB

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

29368389

KEGG Compound ID

Not Available

BioCyc ID

CPD-14280

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71627315

PDB ID

Not Available

ChEBI ID

74691

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Steinberg SJ, Wang SJ, McGuinness MC, Watkins PA: Human liver-specific very-long-chain acyl-coenzyme A synthetase: cDNA cloning and characterization of a second enzymatically active protein. Mol Genet Metab. 1999 Sep;68(1):32-42. doi: 10.1006/mgme.1999.2883. [PubMed:10479480 ]
Noronha A, Modamio J, Jarosz Y, Guerard E, Sompairac N, Preciat G, Danielsdottir AD, Krecke M, Merten D, Haraldsdottir HS, Heinken A, Heirendt L, Magnusdottir S, Ravcheev DA, Sahoo S, Gawron P, Friscioni L, Garcia B, Prendergast M, Puente A, Rodrigues M, Roy A, Rouquaya M, Wiltgen L, Zagare A, John E, Krueger M, Kuperstein I, Zinovyev A, Schneider R, Fleming RMT, Thiele I: The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease. Nucleic Acids Res. 2019 Jan 8;47(D1):D614-D624. doi: 10.1093/nar/gky992. [PubMed:30371894 ]
Wishart DS, Li C, Marcu A, Badran H, Pon A, Budinski Z, Patron J, Lipton D, Cao X, Oler E, Li K, Paccoud M, Hong C, Guo AC, Chan C, Wei W, Ramirez-Gaona M: PathBank: a comprehensive pathway database for model organisms. Nucleic Acids Res. 2020 Jan 8;48(D1):D470-D478. doi: 10.1093/nar/gkz861. [PubMed:31602464 ]
Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for (2E)-eicosenoyl-CoA (MMDBc0047856)

MOL for #<Metabolite:0x00007f5abc2d1658>

3D MOL for #<Metabolite:0x00007f5abc2d1658>

3D SDF for #<Metabolite:0x00007f5abc2d1658>

3D-SDF for #<Metabolite:0x00007f5abc2d1658>

PDB for #<Metabolite:0x00007f5abc2d1658>

3D PDB for #<Metabolite:0x00007f5abc2d1658>

SMILES for #<Metabolite:0x00007f5abc2d1658>

INCHI for #<Metabolite:0x00007f5abc2d1658>

Structure for #<Metabolite:0x00007f5abc2d1658>

3D Structure for #<Metabolite:0x00007f5abc2d1658>