MiMeDB: Thermus thermophilus (MMDBm0000329)

Microbe Identification

Microbe name

Thermus thermophilus

NCBI Taxonomy ID

274

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Deinococcus-thermus

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Thermus

Species

thermophilus

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Not Available

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012895	diphosphate	Phosphoribosyl pyrophosphate	Orotate phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013009	Fe2+	Iron(3+)	Cbb3-type cytochrome c oxidase subunit CcoN1	Oxidation	RHEA	34755880
MMDBr0013038	diphosphate	Phosphoribosyl pyrophosphate	Tryptophan biosynthesis protein TrpCD	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013179	Adenosine triphosphate	ADP	Replicase large subunit	Synthesis of a primer	RHEA	34755880
MMDBr0013262	Chorismate	Prephenate	Protein AroA(G)	Intramolecular transfer of functional group; Non-hydrolytic bond cleavage (or its reversal); Synthesis	RHEA	34755880
MMDBr0013263	Chorismate	Prephenate	Chorismate mutase AroH	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013394	D-Maltose	Trehalose	Trehalose synthase/amylase TreS	Synthesis	RHEA	34755880
MMDBr0014105	(S)-malate(2-)	Hydrogen Ion	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014111	alpha-Ketoisovaleric acid	2-Isopropylmalic acid	Isopropyl malate synthase AMT7	Synthesis	RHEA	34755880
MMDBr0014126	Adenosine triphosphate	ADP	Glycerol kinase	Phosphorylation	RHEA	34755880
MMDBr0014173	CoA	Guanosine diphosphate	Succinate--CoA ligase [GDP-forming] subunit beta	Ligation	RHEA	34755880
MMDBr0014381	Adenosine triphosphate	4-Phospho-L-aspartic acid	Aspartokinase	Dehydrogenation; Phosphorylation	RHEA	34755880
MMDBr0014853	Nitrate	Nitrate	Nitrate/nitrite transporter NarK	Transport	RHEA	34755880
MMDBr0014854	Nitrate	Nitrate	Probable nitrate/nitrite antiporter NarK1	Transport	RHEA	34755880
MMDBr0014996	Water	ADP	Diphosphoinositol polyphosphate phosphohydrolase aps1	Dephosphorylation; Hydrolysis of bond	RHEA	34755880
MMDBr0015106	Water	Adenosine monophosphate	8-oxo-(d)GTP phosphatase	Dephosphorylation; Hydrolysis of bond	RHEA	34755880
MMDBr0015107	Water	Adenosine triphosphate	8-oxo-(d)GTP phosphatase	Dephosphorylation; Hydrolysis of bond	RHEA	34755880
MMDBr0015133	3-Isopropylmalate	Ketoleucine	3-isopropylmalate dehydrogenase AMT6	Dehydrogenation	RHEA	34755880
MMDBr0015916	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	2-C-Methyl-D-erythritol-2,4-cyclodiphosphate	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	Synthesis	RHEA	34755880
MMDBr0015999	Decarboxy-SAM	Hydrogen Ion	N(4)-bis(aminopropyl)spermidine synthase	Synthesis	RHEA	34755880
MMDBr0024360	Adenosine triphosphate	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024628	Adenosine triphosphate	Hydrogen Ion	Phenylalanine--tRNA ligase beta subunit	Ligation	RHEA	34755880
MMDBr0024632	L-Aspartic acid	diphosphate	Aspartate--tRNA(Asp) ligase	Ligation	RHEA	34755880
MMDBr0024666	Adenosine triphosphate	diphosphate	Lysine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024778	(6S)-10-formyltetrahydrofolic acid	Hydrogen Ion	Methionyl-tRNA formyltransferase	Transfer of a formyl group	RHEA	34755880
MMDBr0024779	Water	formate	Peptide deformylase 1	Removal of the N-terminal formyl group	RHEA	34755880
MMDBr0024502	Adenosine triphosphate	diphosphate	Long-chain-fatty-acid--CoA ligase FadD15	Hydrolysis; Ligation; Synthesis	RHEA	34755880
MMDBr0036096	tetradecanoate (n-C14:0)	Tetradecanoyl-CoA	Long-chain-fatty-acid--CoA ligase	Hydrolysis; Ligation; Synthesis	RHEA	34755880
MMDBr0036097	Octadecanoate (N-C18:0)	Stearoyl-CoA	Long-chain-fatty-acid--CoA ligase	Hydrolysis; Ligation; Synthesis	RHEA	34755880
MMDBr0036098	Octadecenoate (N-C18:1)	oleoyl-CoA	Long-chain-fatty-acid--CoA ligase	Hydrolysis; Ligation; Synthesis	RHEA	34755880
MMDBr0036099	Behenic acid	Docosanoyl-CoA	Long-chain-fatty-acid--CoA ligase	Hydrolysis; Ligation; Synthesis	RHEA	34755880
MMDBr0036100	(12R)-hydroxy-(9Z)-octadecenoic acid	(12R)-hydroxy-(9Z)-octadecenoyl-CoA	Long-chain-fatty-acid--CoA ligase	Hydrolysis; Ligation; Synthesis	RHEA	34755880
MMDBr0038698	Oleic acid	oleoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038699	Linoleic acid	Linoleoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038700	Arachidonic acid	Arachidonyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038701	alpha-Linolenic acid	Alpha-Linolenoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038702	Vaccenic acid	11E-Octadecenoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038703	Eicosapentaenoic acid	(5Z,8Z,11Z,14Z,17Z)-Icosapentaenoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038704	Myristoleic acid	(9Z)-tetradecenoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038705	Docosahexaenoic acid	Cervonyl Coenzyme A	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038706	Palmitoleic acid	Palmitoleyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038707	lignoceric acid	Tetracosanoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038708	Erucic acid	13Z-docosenoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880
MMDBr0038709	cerotic acid	hexacosanoyl-CoA	Long-chain-fatty-acid--CoA ligase 1	Hydrolysis; Ligation	RHEA	34755880

Genome Data

Genome Link

MMDBm0000329

Genome Length

1876167 bp

# Predicted Proteins

1992

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-29 16:34:02 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_006461