MiMeDB: Rhodospirillum rubrum (MMDBm0000413)

Microbe Identification

Microbe name

Rhodospirillum rubrum

NCBI Taxonomy ID

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodospirillaceae

Genus

Rhodospirillum

Species

rubrum

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Not Available

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Not Available

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Not Available

Sporulation

Not Available

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0013083	Glucose 1-phosphate	ADP-alpha-D-glucose	Glucose-1-phosphate adenylyltransferase	Reversible transfer of an adenylyl group	RHEA	34755880
MMDBr0013145	Carbon dioxide	Phosphoribosyl pyrophosphate	Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]	Phosphorylation	RHEA	34755880
MMDBr0013243	D-Ribulose 5-phosphate	Xylulose 5-phosphate	Ribulose-phosphate 3-epimerase	Epimerization	RHEA	34755880
MMDBr0014105	(S)-malate(2-)	Hydrogen Ion	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014295	(2R)-3-phosphoglyceric acid	Carbon dioxide	Ribulose bisphosphate carboxylase large chain	Carboxylation	RHEA	34755880
MMDBr0014592	L-Aspartic acid	Hydrogen peroxide	L-aspartate oxidase	Oxidation	RHEA	34755880
MMDBr0014593	L-Aspartic acid	Hydrogen peroxide	L-aspartate oxidase	Oxidation	RHEA	34755880
MMDBr0015518	D-Ribulose 1,5-bisphosphate	(2R)-3-phosphoglyceric acid	Ribulose bisphosphate carboxylase large chain	Carboxylation	RHEA	34755880
MMDBr0016372	Hydrogen Ion	Hydrogen Ion	NAD(P) transhydrogenase subunit alpha	Hydrogenation	RHEA	34755880
MMDBr0016907	Adenosine triphosphate	ADP	ATP synthase subunit alpha	ATP hydrolysis; Synthesis	RHEA	34755880
MMDBr0024380	Iron(3+)	Hydrogen Ion	Ubiquinol-cytochrome c reductase iron-sulfur subunit	Reduction	RHEA	34755880
MMDBr0024589	NAD	Hydrogen Ion	NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase	Reduction	RHEA	34755880
MMDBr0024671	Water	Hydrogen Ion	Acetyl-CoA decarbonylase/synthase complex subunit alpha	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0024686	Water	Hydrogen Ion	Nitrogenase iron protein	Nitrogen fixation	RHEA	34755880
MMDBr0024833	Tetra-mu3-sulfido-tetrairon(2+)	Water	Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein	Reduction	RHEA	34755880
MMDBr0025788	Hydrogen Ion	Water	Alkyl hydroperoxide reductase C	Reduction	RHEA	34755880

Genome Data

Genome Link

Genome Length

4415009 bp

# Predicted Proteins

4077

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-29 16:10:49 UTC

Reference

Source Links

GenBank