MiMeDB: Nitrogen fixation

Reaction Identification

Reaction ID

MMDBr0024686

Reaction type

Nitrogen fixation

Sub-System

Not Available

In non-microbes

In microbes

192

Data Sources

RHEA;

Metabolism

Precursor	Reaction	Product
Nitrogen	Nitrogenase iron protein Nitrogen fixation	Hydrogen

Microbe ID	Organism	Kindgom	Phylum	Oxygen preference
MMDBm0001834	marisnigri	Archaea	Euryarchaeota	Anaerobe
MMDBm0001849	Methanothermobacter thermautotrophicus	Archaea	Euryarchaeota	Anaerobe
MMDBm0001849	Methanothermobacter thermautotrophicus	Archaea	Euryarchaeota	Anaerobe
MMDBm0001849	Methanothermobacter thermautotrophicus	Archaea	Euryarchaeota	Anaerobe
MMDBm0001849	Methanothermobacter thermautotrophicus	Archaea	Euryarchaeota	Anaerobe
MMDBm0000557	Methanococcus voltae	Not Available	Euryarchaeota
MMDBm0881990	Methanobacterium ivanovii	Archaea
MMDBm0881992	Methanothermococcus thermolithotrophicus	Archaea
MMDBm0000672	Methanococcus maripaludis	Not Available	Euryarchaeota
MMDBm0001825	Methanococcus maripaludis	Archaea	Euryarchaeota	Anaerobe
MMDBm0000672	Methanococcus maripaludis	Not Available	Euryarchaeota
MMDBm0001825	Methanococcus maripaludis	Archaea	Euryarchaeota	Anaerobe
MMDBm0000672	Methanococcus maripaludis	Not Available	Euryarchaeota
MMDBm0001825	Methanococcus maripaludis	Archaea	Euryarchaeota	Anaerobe
MMDBm0881992	Methanothermococcus thermolithotrophicus	Archaea
MMDBm0881992	Methanothermococcus thermolithotrophicus	Archaea
MMDBm0881992	Methanothermococcus thermolithotrophicus	Archaea
MMDBm0881990	Methanobacterium ivanovii	Archaea
MMDBm0881990	Methanobacterium ivanovii	Archaea
MMDBm0000562	Methanosarcina barkeri	Not Available	Euryarchaeota
MMDBm0000562	Methanosarcina barkeri	Not Available	Euryarchaeota
MMDBm0000562	Methanosarcina barkeri	Not Available	Euryarchaeota
MMDBm0000562	Methanosarcina barkeri	Not Available	Euryarchaeota
MMDBm0001850	Methanothermobacter marburgensis	Archaea	Euryarchaeota	Obligate anaerobe
MMDBm0001956	Methanocella arvoryzae	Archaea	Euryarchaeota
MMDBm0001848	Methanospirillum hungatei	Archaea	Euryarchaeota	Anaerobe
MMDBm0001850	Methanothermobacter marburgensis	Archaea	Euryarchaeota	Obligate anaerobe
MMDBm0001850	Methanothermobacter marburgensis	Archaea	Euryarchaeota	Obligate anaerobe
MMDBm0001818	Methanocaldococcus jannaschii	Archaea	Euryarchaeota	Anaerobe
MMDBm0001844	Methanosarcina mazei	Archaea	Euryarchaeota	Anaerobe
MMDBm0001992	Magnetococcus marinus	Eubacteria	Proteobacteria	Aerobe
MMDBm0002670	Syntrophobacter fumaroxidans	Eubacteria	Proteobacteria	Anaerobe
MMDBm0001441	Chlorobium phaeobacteroides	Eubacteria	Chlorobi	Facultative anaerobe
MMDBm0002440	Rhodobacter sphaeroides	Eubacteria	Proteobacteria	Aerobe; anaerobe
MMDBm0001542	Desulfotomaculum reducens	Eubacteria	Firmicutes	Anaerobe
MMDBm0001442	Chlorobium phaeovibrioides	Eubacteria	Chlorobi	Facultative anaerobe
MMDBm0002400	Stutzerimonas stutzeri	Eubacteria	Proteobacteria	Aerobe
MMDBm0002475	Roseiflexus sp. RS-1	Eubacteria	Chloroflexi	Aerobe; anaerobe
MMDBm0001213	Alkaliphilus metalliredigens	Eubacteria	Firmicutes	Anaerobe
MMDBm0002476	Roseiflexus castenholzii	Eubacteria	Chloroflexi	Aerobe; anaerobe
MMDBm0001630	Frankia sp. EAN1pec	Eubacteria	Actinobacteria	Aerobe
MMDBm0001857	Methylobacterium sp. 4-46	Eubacteria	Proteobacteria	Facultative
MMDBm0001382	Candidatus Desulforudis audaxviator	Eubacteria	Firmicutes	Anaerobe
MMDBm0001443	Chlorobium limicola	Eubacteria	Chlorobi	Anaerobe
MMDBm0001444	Chlorobium phaeobacteroides	Eubacteria	Chlorobi	Facultative anaerobe
MMDBm0001439	Chlorobaculum parvum	Eubacteria	Chlorobi	Anaerobe
MMDBm0002386	Prosthecochloris aestuarii	Eubacteria	Chlorobi	Anaerobe
MMDBm0002355	Pelodictyon phaeoclathratiforme	Eubacteria	Chlorobi	Anaerobe
MMDBm0002005	Acidithiobacillus ferrooxidans	Eubacteria	Proteobacteria	Aerobe
MMDBm0001728	Klebsiella pneumoniae	Eubacteria	Proteobacteria	Facultative anaerobe
MMDBm0001377	Candidatus Azobacteroides pseudotrichonymphae	Eubacteria	Bacteroidetes
MMDBm0001172	Acidithiobacillus ferrooxidans	Eubacteria	Proteobacteria	Facultative
MMDBm0001511	Cyanothece sp. PCC 7424	Eubacteria	Cyanobacteria	Facultative
MMDBm0509020	Desulfatibacillum aliphaticivorans	Eubacteria	Proteobacteria
MMDBm0001512	Cyanothece sp. PCC 7425	Eubacteria	Cyanobacteria	Facultative
MMDBm0001861	Methylobacterium nodulans	Eubacteria	Proteobacteria	Aerobe
MMDBm0001536	Desulfobacterium autotrophicum	Eubacteria	Proteobacteria	Anaerobe
MMDBm0002722	Tolumonas auensis	Eubacteria	Proteobacteria	Facultative
MMDBm0001551	Desulfovibrio magneticus	Eubacteria	Proteobacteria	Anaerobe
MMDBm0002675	Teredinibacter turnerae	Eubacteria	Proteobacteria	Aerobe
MMDBm0001552	Desulfovibrio salexigens	Eubacteria	Proteobacteria	Anaerobe
MMDBm0002141	Rhodobacter capsulatus	Eubacteria	Proteobacteria	Aerobe; anaerobe
MMDBm0001509	Cyanothece sp. ATCC 51142	Eubacteria	Cyanobacteria	Facultative
MMDBm0001509	Cyanothece sp. ATCC 51142	Eubacteria	Cyanobacteria	Facultative
MMDBm0001509	Cyanothece sp. ATCC 51142	Eubacteria	Cyanobacteria	Facultative
MMDBm0001959	Nostoc sp. PCC 7120	Eubacteria	Cyanobacteria	Aerobe
MMDBm0456231	Rhodobacter sphaeroides	Eubacteria	Proteobacteria
MMDBm0002730	Trichodesmium erythraeum	Eubacteria	Cyanobacteria	Aerobe
MMDBm0000413	Rhodospirillum rubrum	Eubacteria	Proteobacteria
MMDBm0579718		Eubacteria	Proteobacteria
MMDBm0579698		Eubacteria	Proteobacteria
MMDBm0579718		Eubacteria	Proteobacteria
MMDBm0579737		Eubacteria	Proteobacteria
MMDBm0579737		Eubacteria	Proteobacteria
MMDBm0579718		Eubacteria	Proteobacteria
MMDBm0579737		Eubacteria	Proteobacteria
MMDBm0802018		Eubacteria	Firmicutes
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0001959	Nostoc sp. PCC 7120	Eubacteria	Cyanobacteria	Aerobe
MMDBm0001066	Klebsiella pneumoniae	Eubacteria	Proteobacteria	Facultative anaerobe
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0002538	Sinorhizobium meliloti	Eubacteria	Proteobacteria	Aerobe
MMDBm0443716	Rhizobium leguminosarum	Eubacteria	Proteobacteria	Aerobe
MMDBm0443661	Rhizobium etli	Eubacteria	Proteobacteria
MMDBm0426335		Eubacteria	Proteobacteria
MMDBm0001959	Nostoc sp. PCC 7120	Eubacteria	Cyanobacteria	Aerobe
MMDBm0443716	Rhizobium leguminosarum	Eubacteria	Proteobacteria	Aerobe
MMDBm0001066	Klebsiella pneumoniae	Eubacteria	Proteobacteria	Facultative anaerobe
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0001959	Nostoc sp. PCC 7120	Eubacteria	Cyanobacteria	Aerobe
MMDBm0001308	Bradyrhizobium japonicum	Eubacteria	Proteobacteria	Aerobe
MMDBm0579733	Azotobacter chroococcum	Eubacteria	Proteobacteria
MMDBm0426335		Eubacteria	Proteobacteria
MMDBm0001308	Bradyrhizobium japonicum	Eubacteria	Proteobacteria	Aerobe
MMDBm0426335		Eubacteria	Proteobacteria
MMDBm0000401	Acidithiobacillus ferrooxidans	Eubacteria	Proteobacteria
MMDBm0417210	Acidithiobacillus ferridurans	Eubacteria	Proteobacteria
MMDBm0445800		Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000411	Rhodobacter capsulatus	Eubacteria	Proteobacteria
MMDBm0662025	Frankia alni	Eubacteria	Actinobacteria
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0001066	Klebsiella pneumoniae	Eubacteria	Proteobacteria	Facultative anaerobe
MMDBm0001220	Anabaena variabilis	Eubacteria	Cyanobacteria	Aerobe
MMDBm0881981	Trichormus azollae	Eubacteria
MMDBm0000411	Rhodobacter capsulatus	Eubacteria	Proteobacteria
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0417210	Acidithiobacillus ferridurans	Eubacteria	Proteobacteria
MMDBm0579733	Azotobacter chroococcum	Eubacteria	Proteobacteria
MMDBm0579733	Azotobacter chroococcum	Eubacteria	Proteobacteria
MMDBm0579733	Azotobacter chroococcum	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0000340	Azotobacter vinelandii	Eubacteria	Proteobacteria
MMDBm0462330	Azospirillum brasilense	Eubacteria	Proteobacteria
MMDBm0002073	Rhizobium sp. NGR234	Eubacteria	Proteobacteria
MMDBm0002073	Rhizobium sp. NGR234	Eubacteria	Proteobacteria
MMDBm0002073	Rhizobium sp. NGR234	Eubacteria	Proteobacteria
MMDBm0001308	Bradyrhizobium japonicum	Eubacteria	Proteobacteria	Aerobe
MMDBm0000344	Rhizobium leguminosarum	Eubacteria	Proteobacteria	Aerobe
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0000413	Rhodospirillum rubrum	Eubacteria	Proteobacteria
MMDBm0462330	Azospirillum brasilense	Eubacteria	Proteobacteria
MMDBm0462330	Azospirillum brasilense	Eubacteria	Proteobacteria
MMDBm0579733	Azotobacter chroococcum	Eubacteria	Proteobacteria
MMDBm0555705	Pantoea agglomerans	Eubacteria	Proteobacteria	Facultative anaerobe
MMDBm0881250		Not Available
MMDBm0001245	Azorhizobium caulinodans	Eubacteria	Proteobacteria
MMDBm0001245	Azorhizobium caulinodans	Eubacteria	Proteobacteria
MMDBm0881263		Not Available
MMDBm0882008	Anabaena sp. L-31	Eubacteria
MMDBm0882008	Anabaena sp. L-31	Eubacteria
MMDBm0662408	Frankia sp. FaC1	Eubacteria	Actinobacteria
MMDBm0882028	Nostoc sp. MUN8820	Eubacteria
MMDBm0881250		Not Available
MMDBm0000393	Desulfovibrio gigas	Eubacteria	Proteobacteria
MMDBm0498983		Eubacteria	Proteobacteria
MMDBm0498983		Eubacteria	Proteobacteria
MMDBm0498983		Eubacteria	Proteobacteria
MMDBm0881984	Leptolyngbya boryana	Eubacteria
MMDBm0881984	Leptolyngbya boryana	Eubacteria
MMDBm0662025	Frankia alni	Eubacteria	Actinobacteria
MMDBm0000411	Rhodobacter capsulatus	Eubacteria	Proteobacteria
MMDBm0000411	Rhodobacter capsulatus	Eubacteria	Proteobacteria
MMDBm0000411	Rhodobacter capsulatus	Eubacteria	Proteobacteria
MMDBm0000411	Rhodobacter capsulatus	Eubacteria	Proteobacteria
MMDBm0881251		Not Available
MMDBm0002452	Rhodopseudomonas palustris	Eubacteria	Proteobacteria	Aerobe; anaerobe
MMDBm0002450	Rhodopseudomonas palustris	Eubacteria	Proteobacteria	Aerobe; anaerobe
MMDBm0001628	Frankia sp. CcI3	Eubacteria	Actinobacteria	Aerobe
MMDBm0001989	Synechococcus sp. JA-2-3B'a(2-13)	Eubacteria	Cyanobacteria	Facultative
MMDBm0002664	Synechococcus sp. JA-3-3Ab	Eubacteria	Cyanobacteria	Facultative
MMDBm0001440	Chlorobium chlorochromatii	Eubacteria	Chlorobi	Anaerobe
MMDBm0002354	Chlorobium luteolum	Eubacteria	Chlorobi	Anaerobe
MMDBm0002439	Rhodobacter sphaeroides	Eubacteria	Proteobacteria	Aerobe; anaerobe
MMDBm0001518	Dehalococcoides mccartyi	Eubacteria	Chloroflexi	Anaerobe
MMDBm0481919	Alcaligenes faecalis	Eubacteria	Proteobacteria	Aerobe
MMDBm0481919	Alcaligenes faecalis	Eubacteria	Proteobacteria	Aerobe
MMDBm0001220	Anabaena variabilis	Eubacteria	Cyanobacteria	Aerobe
MMDBm0802148		Eubacteria	Firmicutes
MMDBm0802148		Eubacteria	Firmicutes
MMDBm0802148		Eubacteria	Firmicutes
MMDBm0000474	Clostridium pasteurianum	Eubacteria	Firmicutes
MMDBm0882041	Mastigocladus laminosus	Eubacteria
MMDBm0882041	Mastigocladus laminosus	Eubacteria
MMDBm0662402		Eubacteria	Actinobacteria
MMDBm0001517	Dechloromonas aromatica	Eubacteria	Proteobacteria	Facultative
MMDBm0882016	Nostoc sp. PCC 6720	Eubacteria
MMDBm0001510	Cyanothece sp. PCC 8801	Eubacteria	Cyanobacteria	Facultative
MMDBm0001510	Cyanothece sp. PCC 8801	Eubacteria	Cyanobacteria	Facultative
MMDBm0001510	Cyanothece sp. PCC 8801	Eubacteria	Cyanobacteria	Facultative
MMDBm0662025	Frankia alni	Eubacteria	Actinobacteria
MMDBm0001220	Anabaena variabilis	Eubacteria	Cyanobacteria	Aerobe
MMDBm0000628	Ruminiclostridium cellobioparum	Eubacteria	Firmicutes
MMDBm0002045	Zymomonas mobilis	Eubacteria	Proteobacteria
MMDBm0002346	Pectobacterium atrosepticum	Eubacteria	Proteobacteria	Anaerobe
MMDBm0002759	Wolinella succinogenes	Eubacteria	Proteobacteria	Microaerophilic
MMDBm0001438	Chlorobium tepidum	Eubacteria	Chlorobi	Anaerobe
MMDBm0000114	acetobutylicum	Eubacteria	Firmicutes	Anaerobe
MMDBm0001810	Mesorhizobium japonicum	Eubacteria	Proteobacteria	Aerobe
MMDBm0767888		Eubacteria	Firmicutes
MMDBm0767888		Eubacteria	Firmicutes
MMDBm0001653	Gluconacetobacter diazotrophicus	Eubacteria	Proteobacteria	Aerobe

Nitrogen fixation

Nitrogen

Hydrogen