| MMDBm0001231 | Aquifex aeolicus | Eubacteria | Aquificae | Aerobe |
| MMDBm0001953 | Archaeoglobus fulgidus | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001322 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001323 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001324 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001524 | Deinococcus radiodurans | Eubacteria | Deinococcus-thermus | Aerobe |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001658 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001686 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001685 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001772 | Legionella pneumophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001769 | Legionella pneumophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001818 | Methanocaldococcus jannaschii | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0001849 | Methanothermobacter thermautotrophicus | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002423 | Pyrococcus abyssi | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0002424 | Pyrococcus horikoshii | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |
| MMDBm0814443 | Spiroplasma citri | Eubacteria | Tenericutes | |
| MMDBm0778392 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002567 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002565 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002557 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002556 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002555 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002558 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002559 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002561 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002560 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002562 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002563 | Staphylococcus haemolyticus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002564 | Staphylococcus saprophyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0002590 | Streptococcus mutans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0882069 | Synechocystis sp. PCC 6803 | Eubacteria | | |
| MMDBm0001963 | Thermotoga maritima | Eubacteria | Thermotogae | Anaerobe |
| MMDBm0002743 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0098378 | Saccharomyces cerevisiae | Fungi | Ascomycota | |