General References | - Tannock GW: Characteristics of Bacteroides isolates from the cecum of conventional mice. Appl Environ Microbiol. 1977 Apr;33(4):745-50. doi: 10.1128/AEM.33.4.745-750.1977. [PubMed:869524 ]
- Fujisawa T, Benno Y, Yaeshima T, Mitsuoka T: Taxonomic study of the Lactobacillus acidophilus group, with recognition of Lactobacillus gallinarum sp. nov. and Lactobacillus johnsonii sp. nov. and synonymy of Lactobacillus acidophilus group A3 (Johnson et al. 1980) with the type strain of Lactobacillus amylovorus (Nakamura 1981). Int J Syst Bacteriol. 1992 Jul;42(3):487-91. doi: 10.1099/00207713-42-3-487. [PubMed:1503977 ]
- Brenner DJ, Hollis DG, Fanning GR, Weaver RE: Capnocytophaga canimorsus sp. nov. (formerly CDC group DF-2), a cause of septicemia following dog bite, and C. cynodegmi sp. nov., a cause of localized wound infection following dog bite. J Clin Microbiol. 1989 Feb;27(2):231-5. doi: 10.1128/JCM.27.2.231-235.1989. [PubMed:2915017 ]
- Sharpe ME, Garvie EI, Tilbury RH: Some slime-forming heterofermentative species of the genus Lactobacillus. Appl Microbiol. 1972 Feb;23(2):389-97. [PubMed:4259626 ]
- Nakamura LK, Smiley KL: Trnasglucosyl-amylase of Candida tropicalis. Appl Microbiol. 1968 Feb;16(2):216-22. [PubMed:4296315 ]
- Gosink JJ, Woese CR, Staley JT: Polaribacter gen. nov., with three new species, P. irgensii sp. nov., P. franzmannii sp. nov. and P. filamentus sp. nov., gas vacuolate polar marine bacteria of the Cytophaga-Flavobacterium-Bacteroides group and reclassification of 'Flectobacillus glomeratus' as Polaribacter glomeratus comb. nov. Int J Syst Bacteriol. 1998 Jan;48 Pt 1:223-35. doi: 10.1099/00207713-48-1-223. [PubMed:9542092 ]
- Koning SM, Elferink MG, Konings WN, Driessen AJ: Cellobiose uptake in the hyperthermophilic archaeon Pyrococcus furiosus is mediated by an inducible, high-affinity ABC transporter. J Bacteriol. 2001 Sep;183(17):4979-84. doi: 10.1128/jb.183.17.4979-4984.2001. [PubMed:11489849 ]
- BRYANT MP: The characteristics of strains of Selenomonas isolated from bovine rumen contents. J Bacteriol. 1956 Aug;72(2):162-7. doi: 10.1128/JB.72.6.16.2-727.1956. [PubMed:13366893 ]
- Lawson PA, Song Y, Liu C, Molitoris DR, Vaisanen ML, Collins MD, Finegold SM: Anaerotruncus colihominis gen. nov., sp. nov., from human faeces. Int J Syst Evol Microbiol. 2004 Mar;54(Pt 2):413-417. doi: 10.1099/ijs.0.02653-0. [PubMed:15023953 ]
- Eggerth AH: The Gram-positive Non-spore-bearing Anaerobic Bacilli of Human Feces. J Bacteriol. 1935 Sep;30(3):277-99. doi: 10.1128/JB.30.3.277-299.1935. [PubMed:16559837 ]
- Holmstrom K, Collins MD, Moller T, Falsen E, Lawson PA: Subdoligranulum variabile gen. nov., sp. nov. from human feces. Anaerobe. 2004 Jun;10(3):197-203. doi: 10.1016/j.anaerobe.2004.01.004. [PubMed:16701519 ]
- Moon CD, Pacheco DM, Kelly WJ, Leahy SC, Li D, Kopecny J, Attwood GT: Reclassification of Clostridium proteoclasticum as Butyrivibrio proteoclasticus comb. nov., a butyrate-producing ruminal bacterium. Int J Syst Evol Microbiol. 2008 Sep;58(Pt 9):2041-5. doi: 10.1099/ijs.0.65845-0. [PubMed:18768601 ]
- Gibson GR, Probert HM, Loo JV, Rastall RA, Roberfroid MB: Dietary modulation of the human colonic microbiota: updating the concept of prebiotics. Nutr Res Rev. 2004 Dec;17(2):259-75. doi: 10.1079/NRR200479. [PubMed:19079930 ]
- McBride MJ, Xie G, Martens EC, Lapidus A, Henrissat B, Rhodes RG, Goltsman E, Wang W, Xu J, Hunnicutt DW, Staroscik AM, Hoover TR, Cheng YQ, Stein JL: Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis. Appl Environ Microbiol. 2009 Nov;75(21):6864-75. doi: 10.1128/AEM.01495-09. Epub 2009 Aug 28. [PubMed:19717629 ]
- Ze X, Duncan SH, Louis P, Flint HJ: Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon. ISME J. 2012 Aug;6(8):1535-43. doi: 10.1038/ismej.2012.4. Epub 2012 Feb 16. [PubMed:22343308 ]
- Ruan J: [Bergey's Manual of Systematic Bacteriology (second edition) Volume 5 and the study of Actinomycetes systematic in China]. Wei Sheng Wu Xue Bao. 2013 Jun 4;53(6):521-30. [PubMed:24028053 ]
- Houghton KM, Morgan XC, Lagutin K, MacKenzie AD, Vyssotskii M, Mitchell KA, McDonald IR, Morgan HW, Power JF, Moreau JW, Hanssen E, Stott MB: Thermorudis pharmacophila sp. nov., a novel member of the class Thermomicrobia isolated from geothermal soil, and emended descriptions of Thermomicrobium roseum, Thermomicrobium carboxidum, Thermorudis peleae and Sphaerobacter thermophilus. Int J Syst Evol Microbiol. 2015 Dec;65(12):4479-4487. doi: 10.1099/ijsem.0.000598. Epub 2015 Sep 14. [PubMed:26374291 ]
- Noronha A, Modamio J, Jarosz Y, Guerard E, Sompairac N, Preciat G, Danielsdottir AD, Krecke M, Merten D, Haraldsdottir HS, Heinken A, Heirendt L, Magnusdottir S, Ravcheev DA, Sahoo S, Gawron P, Friscioni L, Garcia B, Prendergast M, Puente A, Rodrigues M, Roy A, Rouquaya M, Wiltgen L, Zagare A, John E, Krueger M, Kuperstein I, Zinovyev A, Schneider R, Fleming RMT, Thiele I: The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease. Nucleic Acids Res. 2019 Jan 8;47(D1):D614-D624. doi: 10.1093/nar/gky992. [PubMed:30371894 ]
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