| MMDBm0001198 | Aeromonas hydrophila | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001197 | Aeromonas salmonicida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001210 | Vibrio fischeri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001211 | Aliivibrio salmonicida | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001215 | Allochromatium vinosum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002004 | Alteromonas mediterranea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001379 | Candidatus Blochmannia pennsylvanicus | Eubacteria | Proteobacteria | |
| MMDBm0000341 | Bradyrhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0530857 | Cardiobacterium hominis | Eubacteria | Proteobacteria | |
| MMDBm0001450 | Citrobacter koseri | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0001501 | Cronobacter sakazakii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001588 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001594 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001598 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001600 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001592 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001601 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001599 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001597 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001602 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001591 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001589 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001587 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001586 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001590 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001595 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001593 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000167 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000169 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001565 | Edwardsiella ictaluri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001571 | Enterobacter sp. 638 | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001576 | tasmaniensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001596 | Escherichia fergusonii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001728 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001727 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001865 | Methylococcus capsulatus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001863 | Methylobacterium extorquens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0563912 | Methylobacter tundripaludum | Eubacteria | Proteobacteria | |
| MMDBm0001942 | Nitrosococcus oceani | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002346 | Pectobacterium atrosepticum | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002347 | Pectobacterium carotovorum | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0435700 | Pelagibacterium halotolerans | Eubacteria | Proteobacteria | |
| MMDBm0002361 | Photorhabdus luminescens | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002360 | Photobacterium profundum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002387 | Proteus mirabilis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002389 | Pseudoalteromonas atlantica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002388 | Pseudoalteromonas haloplanktis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002418 | Psychromonas ingrahamii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0000412 | Rhodopseudomonas palustris | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002498 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0547793 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0548594 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002499 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0549171 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002500 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002496 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002495 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550379 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002046 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550426 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550377 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550587 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550758 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002506 | Serratia proteamaculans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002515 | Shewanella amazonensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002527 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002517 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002520 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002523 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002510 | Shewanella denitrificans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002513 | Shewanella frigidimarina | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002524 | Shewanella halifaxensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002518 | Shewanella loihica | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002509 | Shewanella oneidensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002522 | Shewanella pealeana | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002519 | Shewanella putrefaciens | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002526 | Shewanella piezotolerans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002514 | Shewanella sp. ANA-3 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002521 | Shewanella sediminis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002512 | Shewanella sp. MR-4 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002511 | Shewanella sp. MR-7 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002516 | Shewanella sp. W3-18-1 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002525 | Shewanella woodyi | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002535 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002533 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002532 | Shigella dysenteriae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002534 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002719 | Thiobacillus denitrificans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0532693 | Thioalkalivibrio nitratireducens | Eubacteria | Proteobacteria | |
| MMDBm0609206 | Thiothrix nivea | Eubacteria | Proteobacteria | |
| MMDBm0002722 | Tolumonas auensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002745 | Vibrio splendidus | Eubacteria | Proteobacteria | Facultative |
| MMDBm0610847 | Vibrio campbellii | Eubacteria | Proteobacteria | |
| MMDBm0002739 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002741 | Vibrio parahaemolyticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002740 | Vibrio vulnificus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002742 | Vibrio vulnificus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002783 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002780 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002786 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562461 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002784 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002779 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002782 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002778 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002785 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001183 | Acinetobacter sp. ADP1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001189 | Acinetobacter baumannii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001188 | Acinetobacter baumannii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001187 | Acinetobacter baumannii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001185 | Acinetobacter baumannii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001184 | Acinetobacter baumannii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001186 | Acinetobacter baumannii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001172 | Acidithiobacillus ferrooxidans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002005 | Acidithiobacillus ferrooxidans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001212 | Alkalilimnicola ehrlichii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001236 | Aromatoleum aromaticum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001244 | Azoarcus sp. BH72 | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001247 | Azotobacter vinelandii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001294 | avium | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001964 | Bordetella bronchiseptica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001965 | Bordetella parapertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001293 | Bordetella petrii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001966 | Bordetella pertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0417452 | Brevundimonas diminuta | Eubacteria | Proteobacteria | |
| MMDBm0001346 | Burkholderia ambifaria | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001335 | Burkholderia cenocepacia | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001345 | Burkholderia cenocepacia | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001337 | Burkholderia cenocepacia | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001349 | Burkholderia cenocepacia | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001336 | Burkholderia ambifaria | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001332 | Burkholderia sp. 383 | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001344 | Burkholderia multivorans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001342 | Burkholderia mallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001339 | Burkholderia mallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001329 | Burkholderia mallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001338 | Burkholderia mallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001341 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001331 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001340 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001330 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001333 | Burkholderia thailandensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001343 | Burkholderia vietnamiensis | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001418 | Cellvibrio japonicus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001980 | Chromobacterium violaceum | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0494282 | Comamonas testosteroni | Eubacteria | Proteobacteria | |
| MMDBm0001506 | Cupriavidus metallidurans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001504 | Ralstonia eutropha | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001505 | Ralstonia eutropha | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001507 | Cupriavidus taiwanensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001517 | Dechloromonas aromatica | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001665 | Hahella chejuensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0565637 | Halomonas anticariensis | Eubacteria | Proteobacteria | |
| MMDBm0001680 | Halorhodospira halophila | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001684 | Halothiobacillus neapolitanus | Eubacteria | Proteobacteria | Aerobic |
| MMDBm0001701 | Herminiimonas arsenicoxydans | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002720 | Thiomicrospira crunogena | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001721 | Janthinobacterium sp. Marseille | Eubacteria | Proteobacteria | |
| MMDBm0001766 | Laribacter hongkongensis | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001778 | Leptothrix cholodnii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001992 | Magnetococcus marinus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001802 | Marinomonas sp. MWYL1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001801 | Marinobacter nauticus | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001854 | Methylibium petroleiphilum | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001928 | Neisseria gonorrhoeae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000354 | Neisseria gonorrhoeae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001930 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001929 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001945 | Nitrosomonas eutropha | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001977 | Nitrosomonas europaea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001949 | Nitrosospira multiformis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001951 | Nocardioides sp. JS614 | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001347 | Burkholderia phymatum | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001348 | Burkholderia phytofirmans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001334 | Burkholderia xenovorans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002395 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002404 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002407 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002399 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002398 | Pseudomonas entomophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002393 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002402 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002401 | mendocina | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002403 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002397 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002405 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002392 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002406 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002394 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002396 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002400 | Stutzerimonas stutzeri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002415 | Psychrobacter arcticus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002430 | Ralstonia pickettii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002429 | Ralstonia solanacearum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002487 | Saccharophagus degradans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002675 | Teredinibacter turnerae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002761 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0625068 | Frateuria aurantia | Eubacteria | Proteobacteria | |
| MMDBm0565637 | Halomonas anticariensis | Eubacteria | Proteobacteria | |
| MMDBm0000683 | Stenotrophomonas maltophilia | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002761 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |