Ligation

Reaction Identification
Reaction IDMMDBr0024763
Reaction typeLigation
Sub-SystemNot Available
In non-microbes0
In microbes156
Data SourcesRHEA;
Metabolism
PrecursorReactionProduct
L-Tryptophan

Tryptophan--tRNA ligase

Ligation

Hydrogen Ion
Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0001709Hyperthermus butylicusArchaeaCrenarchaeotaAnaerobic
MMDBm0002421Pyrobaculum calidifontisArchaeaCrenarchaeotaFacultative anaerobe
MMDBm0002422Pyrobaculum arsenaticumArchaeaCrenarchaeotaAnaerobe
MMDBm0002691Thermococcus onnurineusArchaeaEuryarchaeotaAnaerobe
MMDBm0002693Thermococcus sibiricusArchaeaEuryarchaeotaAnaerobic
MMDBm0001849Methanothermobacter thermautotrophicusArchaeaEuryarchaeotaAnaerobe
MMDBm0001953Archaeoglobus fulgidusArchaeaEuryarchaeotaAnaerobe
MMDBm0002424Pyrococcus horikoshiiArchaeaEuryarchaeotaAnaerobe
MMDBm0002643Sulfolobus acidocaldariusArchaeaCrenarchaeotaAerobe
MMDBm0001818Methanocaldococcus jannaschiiArchaeaEuryarchaeotaAnaerobe
MMDBm0002690Thermococcus kodakarensisArchaeaEuryarchaeotaAnaerobe
MMDBm0001844Methanosarcina mazeiArchaeaEuryarchaeotaAnaerobe
MMDBm0001843Methanosarcina acetivoransArchaeaEuryarchaeotaAnaerobe
MMDBm0001838Methanopyrus kandleriArchaeaEuryarchaeotaAnaerobe
MMDBm0002425Pyrococcus furiosusArchaeaEuryarchaeotaAnaerobe
MMDBm0001954Pyrobaculum aerophilumArchaeaCrenarchaeotaAerobe; anaerobe
MMDBm0002642Sulfolobus tokodaiiArchaeaCrenarchaeotaAerobe
MMDBm0002702Thermoplasma volcaniumArchaeaEuryarchaeotaFacultative anaerobe
MMDBm0002641Sulfolobus solfataricusNot AvailableCrenarchaeotaAerobe
MMDBm0002701Thermoplasma acidophilumArchaeaEuryarchaeotaFacultative anaerobe
MMDBm0001671Halobacterium salinarumArchaeaEuryarchaeotaAerobe
MMDBm0001671Halobacterium salinarumArchaeaEuryarchaeotaAerobe
MMDBm0002423Pyrococcus abyssiArchaeaEuryarchaeotaAnaerobe
MMDBm0001952Aeropyrum pernixArchaeaCrenarchaeotaAerobe
MMDBm0001295Borreliella burgdorferiEubacteriaSpirochaetesMicroaerophilic
MMDBm0001231Aquifex aeolicusEubacteriaAquificaeAerobe
MMDBm0002723Treponema pallidumEubacteriaSpirochaetesAnaerobe
MMDBm0001422Chlamydia trachomatisEubacteriaChlamydiae
MMDBm0761340Geobacillus stearothermophilusEubacteriaFirmicutesAerobe
MMDBm0541555Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002492Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0550758Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002588Streptococcus pyogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0002592Streptococcus pyogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0001248Bacillus subtilisEubacteriaFirmicutesFacultative aerobe
MMDBm0001658Haemophilus influenzaeEubacteriaProteobacteriaAerobe; facultative anaerobe
MMDBm0001905Mycoplasma genitaliumEubacteriaTenericutesFacultative anaerobe
MMDBm0001685Helicobacter pyloriEubacteriaProteobacteriaAerobe
MMDBm0001322Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0002345Pasteurella multocidaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001324Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0001312Brucella melitensisEubacteriaProteobacteriaAerobe
MMDBm0001313Brucella suisEubacteriaProteobacteriaAerobe
MMDBm0000162Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0542442Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001884Mycobacterium bovisEubacteriaActinobacteriaAerobe
MMDBm0002556Staphylococcus aureusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002555Staphylococcus aureusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002561Staphylococcus aureusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002585Streptococcus pneumoniaeEubacteriaFirmicutesFacultative anaerobe
MMDBm0002586Streptococcus pneumoniaeEubacteriaFirmicutesFacultative anaerobe
MMDBm0002587Streptococcus pyogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0882069Synechocystis sp. PCC 6803Eubacteria
MMDBm0001906Mycoplasma pneumoniaeEubacteriaTenericutesAerobe; anaerobe
MMDBm0001882Mycobacterium tuberculosisEubacteriaActinobacteriaAerobe
MMDBm0001880Mycobacterium tuberculosisEubacteriaActinobacteriaAerobe
MMDBm0002464Rickettsia belliiEubacteriaProteobacteriaAerobe
MMDBm0798865Clostridium longisporumEubacteriaFirmicutes
MMDBm0001881Mycobacterium lepraeEubacteriaActinobacteriaAerobe
MMDBm0002463Rickettsia felisEubacteriaProteobacteriaAerobe
MMDBm0001209Vibrio fischeriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002557Staphylococcus aureusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002560Staphylococcus epidermidisEubacteriaFirmicutesFacultative anaerobe
MMDBm0001971Campylobacter jejuniEubacteriaProteobacteriaMicroaerophilic
MMDBm0002593Streptococcus pyogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0002462Rickettsia typhiEubacteriaProteobacteriaAerobe
MMDBm0001775Leifsonia xyliEubacteriaActinobacteriaAerobe
MMDBm0002559Staphylococcus aureusEubacteriaFirmicutesFacultative anaerobe
MMDBm0002558Staphylococcus aureusEubacteriaFirmicutesFacultative anaerobe
MMDBm0001784Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0002759Wolinella succinogenesEubacteriaProteobacteriaMicroaerophilic
MMDBm0002742Vibrio vulnificusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002369Porphyromonas gingivalisEubacteriaBacteroidetesAnaerobe
MMDBm0002361Photorhabdus luminescensEubacteriaProteobacteriaFacultative
MMDBm0001978Mycoplasma gallisepticumEubacteriaTenericutesFacultative
MMDBm0001652Gloeobacter violaceusEubacteriaCyanobacteria
MMDBm0002659Synechococcus sp. WH 8102EubacteriaCyanobacteriaFacultative
MMDBm0002372Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002448Rhodopirellula balticaEubacteriaPlanctomycetesAerobe
MMDBm0002373Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002371Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0001979Helicobacter hepaticusEubacteriaProteobacteriaAerobe
MMDBm0001969Haemophilus ducreyiEubacteriaProteobacteriaAnaerobe
MMDBm0001378Candidatus Blochmannia floridanusEubacteriaProteobacteria
MMDBm0001966Bordetella pertussisEubacteriaProteobacteriaAerobe
MMDBm0001965Bordetella parapertussisEubacteriaProteobacteriaAerobe
MMDBm0001964Bordetella bronchisepticaEubacteriaProteobacteriaAerobe
MMDBm0000460Bacillus anthracisEubacteriaFirmicutes
MMDBm0001432Chlamydophila caviaeEubacteriaChlamydiae
MMDBm0002634Streptomyces avermitilisEubacteriaActinobacteriaAerobe
MMDBm0002634Streptomyces avermitilisEubacteriaActinobacteriaAerobe
MMDBm0001575Enterococcus faecalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0001976Tropheryma whippleiEubacteriaActinobacteriaAerobe
MMDBm0001975Tropheryma whippleiEubacteriaActinobacteriaAerobe
MMDBm0000368Shigella flexneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002772Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002741Vibrio parahaemolyticusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002394Pseudomonas syringaeEubacteriaProteobacteriaAerobe
MMDBm0002392Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0001455Clostridium tetaniEubacteriaFirmicutesAnaerobe
MMDBm0001308Bradyrhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0002635Streptomyces coelicolorEubacteriaActinobacteriaAerobe
MMDBm0002562Staphylococcus epidermidisEubacteriaFirmicutesFacultative anaerobe
MMDBm0001970Wigglesworthia glossinidiaEubacteriaProteobacteriaNa
MMDBm0002740Vibrio vulnificusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002709Thermosynechococcus elongatusEubacteriaCyanobacteria
MMDBm0002590Streptococcus mutansEubacteriaFirmicutesFacultative anaerobe
MMDBm0002589Streptococcus agalactiaeEubacteriaFirmicutesFacultative anaerobe
MMDBm0002591Streptococcus agalactiaeEubacteriaFirmicutesFacultative anaerobe
MMDBm0002509Shewanella oneidensisEubacteriaProteobacteriaFacultative
MMDBm0001973Oceanobacillus iheyensisEubacteriaFirmicutesAerobe
MMDBm0001908Mycoplasma penetransEubacteriaTenericutesFacultative
MMDBm0001486Corynebacterium efficiensEubacteriaActinobacteriaFacultative aerobe
MMDBm0001323Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0001485Corynebacterium glutamicumEubacteriaActinobacteriaFacultative aerobe
MMDBm0002761Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0001972Xanthomonas citriEubacteriaProteobacteriaAerobe
MMDBm0001358Thermoanaerobacter tengcongensisEubacteriaFirmicutesAnaerobe
MMDBm0000185Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0001200Agrobacterium tumefaciensEubacteriaProteobacteriaAerobe
MMDBm0001454Clostridium perfringensEubacteriaFirmicutesAnaerobe
MMDBm0002429Ralstonia solanacearumEubacteriaProteobacteriaAerobe
MMDBm0001785Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0001959Nostoc sp. PCC 7120EubacteriaCyanobacteriaAerobe
MMDBm0562461Yersinia pestisEubacteriaProteobacteria
MMDBm0001786Listeria innocuaEubacteriaFirmicutesFacultative anaerobe
MMDBm0002461Rickettsia conoriiEubacteriaProteobacteriaAerobe
MMDBm0002538Sinorhizobium melilotiEubacteriaProteobacteriaAerobe
MMDBm0000114acetobutylicumEubacteriaFirmicutesAnaerobe
MMDBm0001810Mesorhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0001907Mycoplasma pulmonisEubacteriaTenericutesFacultative anaerobe
MMDBm0795844Streptococcus pyogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0001409Caulobacter crescentusEubacteriaProteobacteriaAerobe
MMDBm0001762Lactococcus lactisEubacteriaFirmicutesFacultative anaerobe
MMDBm0544420Klebsiella aerogenesEubacteriaProteobacteria
MMDBm0002391Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0001930Neisseria meningitidisEubacteriaProteobacteriaAerobe
MMDBm0001929Neisseria meningitidisEubacteriaProteobacteriaAerobe
MMDBm0000028Bacillus haloduransEubacteriaFirmicutesFacultative aerobe
MMDBm0002739Vibrio choleraeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002635Streptomyces coelicolorEubacteriaActinobacteriaAerobe
MMDBm0002771Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0001367Campylobacter jejuniEubacteriaProteobacteriaMicroaerophilic
MMDBm0001423Chlamydia muridarumEubacteriaChlamydiae
MMDBm0002733Ureaplasma parvumEubacteriaTenericutesFacultative
MMDBm0001524Deinococcus radiodurans EubacteriaDeinococcus-thermusAerobe
MMDBm0001524Deinococcus radiodurans EubacteriaDeinococcus-thermusAerobe
MMDBm0001963Thermotoga maritimaEubacteriaThermotogaeAnaerobe
MMDBm0637965Chlamydia pneumoniaeEubacteriaChlamydiae
MMDBm0002460Rickettsia prowazekiiEubacteriaProteobacteriaAerobe
MMDBm0001686Helicobacter pyloriEubacteriaProteobacteriaAerobe
MMDBm0101577Schizosaccharomyces pombeFungiAscomycota
MMDBm0159119Encephalitozoon cuniculiFungiMicrosporidia
MMDBm0098378Saccharomyces cerevisiaeFungiAscomycota
MMDBm0101577Schizosaccharomyces pombeFungiAscomycota
MMDBm0098378Saccharomyces cerevisiaeFungiAscomycota