| MMDBm0785739 | Abiotrophia defectiva | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0480821 | Achromobacter xylosoxidans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000004 | Acidaminococcus intestini | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000008 | Acinetobacter radioresistens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0646414 | Schaalia cardiffensis | Eubacteria | Actinobacteria | Obligate anaerobe |
| MMDBm0645903 | Actinomyces naeslundii | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0645907 | Actinomyces oris | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0646428 | Schaalia turicensis | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0000009 | Adlercreutzia equolifaciens | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0785760 | Aerococcus viridans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000011 | Aggregatibacter aphrophilus | Eubacteria | Proteobacteria | Facultative |
| MMDBm0000016 | Alcaligenes faecalis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0481922 | Alcaligenes faecalis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000018 | Alistipes finegoldii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394805 | Alistipes onderdonkii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394807 | Alistipes putredinis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000019 | Alistipes shahii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393872 | Alloprevotella tannerae | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000020 | Anaerococcus prevotii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0810309 | Anaerococcus vaginalis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0801616 | Anaerofustis stercorihominis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001232 | Arcanobacterium haemolyticum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0000023 | Arcobacter butzleri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0723927 | Atopobium minutum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001243 | Atopobium parvulum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0723989 | Lancefieldella rimae | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000033 | Bacillus vallismortis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0514239 | Campylobacter ureolyticus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0393007 | Barnesiella intestinihominis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0001279 | Bartonella quintana | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002290 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648002 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001288 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0002230 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001289 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0002078 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648030 | Bifidobacterium boum | Eubacteria | Actinobacteria | Facultative anaerobe, air+co2 |
| MMDBm0648069 | Bifidobacterium coryneforme | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000075 | Bifidobacterium longum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648095 | Bifidobacterium longum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000084 | Bifidobacterium longum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000087 | Bifidobacterium mongoliense | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0000089 | Bifidobacterium pseudolongum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648166 | Bifidobacterium scardovii | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0662671 | Candidatus Blastococcus massiliensis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0802311 | Blautia wexlerae | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0665201 | Brachybacterium paraconglomeratum | Eubacteria | Actinobacteria | Aerobe, microaerophile |
| MMDBm0641709 | Brachyspira pilosicoli | Eubacteria | Spirochaetes | Anaerobe |
| MMDBm0423522 | Bradyrhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000096 | Brevibacillus borstelensis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0663577 | Brevibacterium casei | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0663608 | Brevibacterium ravenspurgense | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0766462 | Brochothrix thermosphacta | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0808543 | Bulleidia extructa | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0798353 | Butyricicoccus pullicaecorum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001371 | Campylobacter concisus | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0000100 | Campylobacter fetus | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0513982 | Campylobacter gracilis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0513988 | Campylobacter hyointestinalis | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0001373 | Campylobacter lari | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0514216 | Campylobacter rectus | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0514218 | Campylobacter showae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0881918 | Candidatus Nitrososphaera gargensis | Not Available | Thaumarchaeota | Aerobe |
| MMDBm0001417 | Clostridium lentocellum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0685945 | Cellulosimicrobium cellulans | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0000882 | Cetobacterium somerae | Eubacteria | Fusobacteria | Anaerobe |
| MMDBm0000107 | Cloacibacillus evryensis | Eubacteria | Synergistetes | Anaerobe |
| MMDBm0000114 | acetobutylicum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0798609 | Clostridium botulinum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0798785 | Clostridium cadaveris | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802708 | Enterocloster citroniae | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802089 | Hungateiclostridium clariflavum | Eubacteria | Firmicutes | |
| MMDBm0000125 | Enterocloster clostridioformis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805202 | Terrisporobacter glycolicus | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0801127 | Hungatella hathewayi | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0801128 | Hungatella hathewayi | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0802992 | Lacrimispora indolis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0808650 | Clostridium innocuum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802894 | Clostridium methoxybenzovorans | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0808655 | Clostridium saccharogumia | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0798939 | Clostridium sartagoforme | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805008 | Paeniclostridium sordellii | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0798946 | Clostridium sporogenes | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0806093 | Clostridium sporosphaeroides | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0802901 | Clostridium symbiosum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0798974 | Clostridium tyrobutyricum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0806095 | Clostridium viride | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0724111 | Collinsella tanakaei | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001480 | testosteroni | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000143 | Coprococcus catus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0648904 | Corynebacterium amycolatum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0648978 | Corynebacterium durum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0001490 | Corynebacterium kroppenstedtii5 | Eubacteria | Actinobacteria | Facultative aerobe |
| MMDBm0649080 | Corynebacterium propinquum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0002160 | Corynebacterium ulcerans | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0001501 | Cronobacter sakazakii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001503 | Cryptobacterium curtum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0667921 | Curtobacterium flaccumfaciens | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0665710 | Dermacoccus nishinomiyaensis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0510057 | Desulfovibrio desulfuricans | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0809578 | Dialister invisus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0809587 | Dialister succinatiphilus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0649955 | Dietzia cinnamea | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000147 | Dorea formicigenerans | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000150 | Eggerthella lenta | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000151 | Eggerthella sp. YY7918 | Eubacteria | Actinobacteria | Nanaerobe |
| MMDBm0808643 | Eggerthia catenaformis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0503548 | Eikenella corrodens | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0534800 | Enterobacter hormaechei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0534801 | Enterobacter hormaechei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0786738 | Enterococcus asini | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786739 | Enterococcus avium | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786742 | Enterococcus caccae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786748 | Enterococcus casseliflavus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786754 | Enterococcus cecorum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786759 | Enterococcus dispar | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786760 | Enterococcus durans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002278 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001575 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787501 | Enterococcus gallinarum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000157 | Enterococcus hirae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787536 | Enterococcus phoeniculicola | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000688 | Enterococcus saccharolyticus | Eubacteria | Firmicutes | |
| MMDBm0533123 | Atlantibacter hermannii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0806711 | Eubacterium brachy | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0801642 | Eubacterium cellulosolvens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000182 | Faecalitalea cylindroides | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0805392 | Agathobaculum desmolans | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0000171 | Eubacterium eligens ATCC 27750 | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001104 | Anaerobutyricum hallii | Eubacteria | Firmicutes | |
| MMDBm0000172 | Eubacterium limosum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0801634 | Eubacterium ramulus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000173 | Eubacterium rectale | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0806718 | Eubacterium saphenum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0806720 | Eubacterium sulci | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805488 | Faecalibacterium prausnitzii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805490 | Faecalibacterium prausnitzii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000181 | Faecalibacterium prausnitzii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002188 | Filifactor alocis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805538 | Flavonifractor plautii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000185 | Fusobacterium nucleatum | Eubacteria | Fusobacteria | Anaerobe |
| MMDBm0416256 | Fusobacterium russii | Eubacteria | Fusobacteria | Microaerophile |
| MMDBm0416224 | Fusobacterium nucleatum | Eubacteria | Fusobacteria | Anaerobe |
| MMDBm0784087 | Gemella haemolysans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0784091 | Gemella morbillorum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000187 | Gemella sanguinis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0784094 | Gemella sanguinis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0650453 | Gordonia terrae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0650454 | Gordonia terrae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0786510 | Granulicatella adiacens | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786514 | Granulicatella elegans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0609478 | Grimontia hollisae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0570882 | Haemophilus haemolyticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002186 | Haemophilus influenzae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000190 | Haemophilus parainfluenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0570936 | Haemophilus sputorum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0881919 | Halococcus morrhuae | Not Available | Euryarchaeota | Aerobe |
| MMDBm0515049 | Helicobacter canadensis | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0810781 | Kallipyga massiliensis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0808774 | Kandleria vitulina | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0503626 | Kingella oralis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0682673 | Kocuria palustris | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001729 | Kocuria rhizophila | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0802953 | Lachnospira multipara | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001737 | Lactobacillus acidophilus | Eubacteria | Firmicutes | Anaerobe; microaerophile |
| MMDBm0001756 | Lactobacillus amylolyticus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0792696 | Ligilactobacillus animalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792735 | Lactobacillus coleohominis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792831 | Lactobacillus coryniformis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792594 | Latilactobacillus curvatus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001739 | Lactobacillus delbrueckii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001747 | Limosilactobacillus fermentum | Eubacteria | Firmicutes | Facultative anaerobe; microaerophile |
| MMDBm0001743 | Lactobacillus gasseri | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792742 | Lactobacillus gastricus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001745 | Lactobacillus helveticus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790545 | Lactobacillus iners | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790564 | Lactobacillus jensenii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002092 | Lactobacillus johnsonii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001735 | Lactobacillus johnsonii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792746 | Lactobacillus mucosae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792769 | Limosilactobacillus oris | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790389 | Lactiplantibacillus pentosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001751 | Lactiplantibacillus plantarum | Eubacteria | Firmicutes | Microaerophilic |
| MMDBm0001752 | Lactobacillus rhamnosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001738 | Lactobacillus sakei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792753 | Lactobacillus vaginalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0793769 | Lactococcus raffinolactis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0491302 | Lautropia mirabilis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001779 | Leptotrichia buccalis | Eubacteria | Fusobacteria | Anaerobe |
| MMDBm0793164 | Leuconostoc lactis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0793152 | Leuconostoc gelidum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0793161 | Leuconostoc lactis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766676 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001810 | Mesorhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001817 | Methanobrevibacter ruminantium | Not Available | Euryarchaeota | Anaerobe |
| MMDBm0881917 | Methanomassiliicoccus luminyensis | Not Available | Euryarchaeota | Anaerobe |
| MMDBm0001846 | Methanosphaera stadtmanae | Not Available | Euryarchaeota | Anaerobe |
| MMDBm0001858 | Methylobacterium radiotolerans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0670570 | Microbacterium paraoxydans | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001872 | Micrococcus luteus | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000002 | Micromonospora aurantiaca | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0809111 | Mitsuokella jalaludinii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001876 | Mobiluncus curtisii | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0806691 | Mogibacterium timidum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001878 | Moraxella catarrhalis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0651046 | Mycobacterium avium | Eubacteria | Actinobacteria | Microaerophile |
| MMDBm0002052 | Mycoplasma hominis | Eubacteria | Tenericutes | Anaerobe |
| MMDBm0815005 | Mycoplasma pneumoniae | Eubacteria | Tenericutes | Anaerobe |
| MMDBm0503661 | Neisseria cinerea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0503667 | Neisseria elongata | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000222 | Ochrobactrum intermedium | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0393374 | Odoribacter laneus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0723994 | Olsenella profusa | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0002330 | Olsenella uli | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0803068 | Oribacterium sinus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0555709 | Pantoea agglomerans | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0501221 | Parasutterella excrementihominis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002349 | Pediococcus pentosaceus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0810479 | Peptoniphilus indolicus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0810484 | Peptoniphilus lacrimalis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0810498 | Peptoniphilus timonensis | Eubacteria | Firmicutes | |
| MMDBm0805074 | Peptostreptococcus anaerobius | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805078 | Peptostreptococcus stomatis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000241 | Porphyromonas asaccharolytica | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000245 | Prevotella denticola | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393995 | Prevotella nanceiensis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394039 | Prevotella timonensis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394040 | Prevotella timonensis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394042 | Prevotella veroralis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0692554 | Acidipropionibacterium acidipropionici | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0002383 | Propionibacterium acnes | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0692716 | Cutibacterium avidum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0002385 | freudenreichii | Eubacteria | Actinobacteria | Facultative |
| MMDBm0692558 | Acidipropionibacterium jensenii | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0692584 | Pseudopropionibacterium propionicum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0803106 | Pseudobutyrivibrio ruminis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002397 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002403 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002086 | Pseudomonas stutzeri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0801900 | Pseudoramibacter alactolyticus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0645329 | Pyramidobacter piscolens | Eubacteria | Synergistetes | Anaerobe |
| MMDBm0658815 | Rhodococcus hoagii | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0658861 | Rhodococcus rhodochrous | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000257 | Roseburia hominis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0685377 | Rothia aeria | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002480 | Rothia dentocariosa | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002479 | Rothia mucilaginosa | Eubacteria | Actinobacteria | Microaerophile |
| MMDBm0002484 | Ruminococcus albus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000262 | Ruminococcus bicirculans | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001105 | Ruminococcus callidus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805711 | Ruminococcus flavefaciens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0648739 | Scardovia inopinata | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0809204 | Selenomonas ruminantium | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0724468 | Slackia exigua | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0724473 | Slackia piriformis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0808830 | Solobacterium moorei | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0808831 | Solobacterium moorei | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0471855 | Sphingomonas paucimobilis | Eubacteria | Proteobacteria | |
| MMDBm0779545 | Staphylococcus intermedius | Eubacteria | Firmicutes | |
| MMDBm0000269 | Candidatus Stoquefichus massiliensis | Eubacteria | Firmicutes | |
| MMDBm0002597 | Streptococcus agalactiae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794438 | Streptococcus australis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794415 | Streptococcus constellatus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794420 | Streptococcus constellatus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794454 | Streptococcus cristatus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794469 | Streptococcus dysgalactiae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002252 | Streptococcus gallolyticus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002607 | Streptococcus gordonii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794539 | Streptococcus infantis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794428 | Streptococcus intermedius | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794553 | Streptococcus lutetiensis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794581 | Streptococcus mitis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794617 | Streptococcus mutans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002630 | Streptococcus oralis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794800 | Streptococcus parasanguinis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002632 | Streptococcus parauberis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794814 | Streptococcus peroris | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0808723 | Faecalicoccus pleomorphus | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0002610 | Streptococcus pneumoniae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002633 | Streptococcus pseudopneumoniae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002598 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000277 | Streptococcus salivarius | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002603 | Streptococcus salivarius | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0797180 | Streptococcus sp. I-G2 | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0796207 | Streptococcus thoraltensis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002614 | Streptococcus uberis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0796228 | Streptococcus vestibularis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0519718 | Succinivibrio dextrinosolvens | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002641 | Sulfolobus solfataricus | Not Available | Crenarchaeota | Aerobe |
| MMDBm0501236 | Sutterella parvirubra | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0557387 | Tatumella ptyseos | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001976 | Tropheryma whipplei | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0646445 | Trueperella pyogenes | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0815377 | Ureaplasma parvum | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0815403 | Ureaplasma urealyticum | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0646461 | Varibaculum cambriense | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0809729 | Veillonella atypica | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0809739 | Veillonella dispar | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000287 | Veillonella parvula | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002190 | Vibrio furnissii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000288 | Vibrio mimicus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0793461 | Weissella cibaria | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0793464 | Weissella confusa | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000513 | Actinomyces viscosus | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0001040 | Bifidobacterium breve | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001111 | Actinomyces graevenitzii | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0393911 | Prevotella albensis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393941 | Prevotella conceptionensis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393956 | Prevotella enoeca | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0646416 | Schaalia georgiae | Eubacteria | Actinobacteria | |
| MMDBm0658814 | Rhodococcus hoagii | Eubacteria | Actinobacteria | |
| MMDBm0692719 | Cutibacterium granulosum | Eubacteria | Actinobacteria | |
