MiMeDB: Bifidobacterium longum (MMDBm0000074)

Microbe Identification

Microbe name

Bifidobacterium longum

NCBI Taxonomy ID

216816

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Actinobacteria

Class

Actinobacteria

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Species

longum

Strain

Not Available

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Number of membranes

Oxygen preference

Anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

HostAssociated

Biotic relationship

Free living

Cell arrangement

Clusters - Pairs - Singles

Sporulation

Clusters - Pairs - Singles

Metabolism

Saccharolytic, fermentative

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Data Source	Reference
Human			Human Oral Microbiome Database (HOMD)	20624719
Human	Gut	Feces	GutFeeling KnowledgeBase	31509535
Human		Stool	Human Microbiome Project	28953883
Human	Perianal space		BacDive	34718743
Human	Rectum		BacDive	34718743
Human	Gastrointestinal tract		BacDive	34718743
Human	Large intestine		BacDive	34718743
Human	Bronchi		BacDive	34718743
Human	Vagina		BacDive	34718743
Human	Oral cavity	Saliva	Disbiome	31247001
Human	Vagina	Mucosa	Disbiome	29791775
Human	Large intestine	Feces	Disbiome	20603222
Human	Large intestine	Feces	Disbiome	30619212
Human	Large intestine	Feces	Disbiome	32294965
Human	Large intestine	Feces	Disbiome	21814872
Human	Large intestine	Feces	Disbiome	7574628
Human	Large intestine	Feces	Disbiome	30567928
Human	Large intestine	Feces	Disbiome	26891226
Human	Large intestine	Feces	Disbiome	32240032
Human	Large intestine	Feces	Disbiome	29379536
Human	Large intestine	Feces	Disbiome	32235826
Human	Large intestine	Feces	Disbiome	24021287
Human	Large intestine	Feces	Disbiome	29379536
Human	Large intestine	Feces	Disbiome	29379536

Health Effects

Host	Related Health Condition	Microbal response/effect	Data Source	Reference
Human	Parkinson's disease	Elevated	Disbiome	31247001
Human	Preterm birth	Reduced	Disbiome	29791775
Human	Autism	Reduced	Disbiome	20603222
Human	Cirrhosis	Reduced	Disbiome	21814872
Human	Cirrhosis	Reduced	Disbiome	21814872
Human	Crohn's disease	Reduced	Disbiome	30567928
Human	Lung Cancer	Reduced	Disbiome	32240032
Human	Obesity	Reduced	Disbiome	29379536
Human	Schizophrenia	Elevated	Disbiome	32235826
Human	Ulcerative colitis	Elevated	Disbiome	24021287
Human	Non-alcoholic fatty liver disease	Reduced	Disbiome	29379536
Human	Non-alcoholic fatty liver disease	Reduced	Disbiome	31726978

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0013520	Taurochenodesoxycholic acid	Chenodeoxycholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0013521	Taurochenodesoxycholic acid	Chenodeoxycholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0013857	Glycocholic acid	Cholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0013858	Glycocholic acid	Cholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016276	Cholic acid	Taurocholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016277	Taurocholic acid	Cholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016278	Chenodeoxycholic acid	Chenodeoxycholic acid glycine conjugate	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016279	Chenodeoxycholic acid glycine conjugate	Chenodeoxycholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016330	glycodeoxycholic acid	Deoxycholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016331	glycodeoxycholic acid	Deoxycholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016332	Taurodeoxycholic acid	Deoxycholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0016333	Taurodeoxycholic acid	Deoxycholic acid	Conjugated bile acid hydrolase	Hydrolysis of bond	RHEA	34755880

Genome Data

Genome Link

MMDBm0000074

Genome Length

2419238 bp

# Predicted Proteins

1951

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:48:26 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_015067