Decarboxylation

Reaction Identification
Reaction IDMMDBr0013670
Reaction typeDecarboxylation
Sub-SystemNot Available
In non-microbes0
In microbes162
Data SourcesRHEA;
Metabolism
PrecursorReactionProduct
L-Arginine

Pyruvoyl-dependent arginine decarboxylase AaxB

Decarboxylation

Agmatine
Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0001433Chlamydophila abortusEubacteriaChlamydiae
MMDBm0001432Chlamydophila caviaeEubacteriaChlamydiae
MMDBm0001435Chlamydophila felisEubacteriaChlamydiae
MMDBm0001423Chlamydia muridarumEubacteriaChlamydiae
MMDBm0637965Chlamydia pneumoniaeEubacteriaChlamydiae
MMDBm0001426Chlamydia trachomatisEubacteriaChlamydiae
MMDBm0001424Chlamydia trachomatisEubacteriaChlamydiae
MMDBm0001425Chlamydia trachomatisEubacteriaChlamydiae
MMDBm0001422Chlamydia trachomatisEubacteriaChlamydiae
MMDBm0541555Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001952Aeropyrum pernixArchaeaCrenarchaeotaAerobe
MMDBm0001366Caldivirga maquilingensisArchaeaCrenarchaeotaMicroaerophilic
MMDBm0001709Hyperthermus butylicusArchaeaCrenarchaeotaAnaerobic
MMDBm0001714Ignicoccus hospitalisArchaeaCrenarchaeotaAnaerobe
MMDBm0001813Metallosphaera sedulaArchaeaCrenarchaeotaAerobe
MMDBm0001954Pyrobaculum aerophilumArchaeaCrenarchaeotaAerobe; anaerobe
MMDBm0002422Pyrobaculum arsenaticumArchaeaCrenarchaeotaAnaerobe
MMDBm0002421Pyrobaculum calidifontisArchaeaCrenarchaeotaFacultative anaerobe
MMDBm0002420Pyrobaculum islandicumArchaeaCrenarchaeotaAnaerobe
MMDBm0002703Thermoproteus neutrophilusArchaeaCrenarchaeotaAnaerobe
MMDBm0002641Sulfolobus solfataricusNot AvailableCrenarchaeotaAerobe
MMDBm0002577Staphylothermus marinusArchaeaCrenarchaeotaAnaerobic
MMDBm0002643Sulfolobus acidocaldariusArchaeaCrenarchaeotaAerobe
MMDBm0002648Sulfolobus islandicusArchaeaCrenarchaeotaAerobe
MMDBm0002649Sulfolobus islandicusArchaeaCrenarchaeotaAerobe
MMDBm0002645Sulfolobus islandicusArchaeaCrenarchaeotaAerobe
MMDBm0002644Sulfolobus islandicusArchaeaCrenarchaeotaAerobe
MMDBm0002647Sulfolobus islandicusArchaeaCrenarchaeotaFacultative aerobe
MMDBm0002646Sulfolobus islandicusArchaeaCrenarchaeotaFacultative aerobe
MMDBm0002642Sulfolobus tokodaiiArchaeaCrenarchaeotaAerobe
MMDBm0001443Chlorobium limicolaEubacteriaChlorobiAnaerobe
MMDBm0002354Chlorobium luteolumEubacteriaChlorobiAnaerobe
MMDBm0001439Chlorobaculum parvumEubacteriaChlorobiAnaerobe
MMDBm0001444Chlorobium phaeobacteroidesEubacteriaChlorobiFacultative anaerobe
MMDBm0001442Chlorobium phaeovibrioidesEubacteriaChlorobiFacultative anaerobe
MMDBm0001448Chloroherpeton thalassiumEubacteriaChlorobiFacultative
MMDBm0001438Chlorobium tepidumEubacteriaChlorobiAnaerobe
MMDBm0001672Halobacterium salinarumArchaeaEuryarchaeotaAnaerobe
MMDBm0001671Halobacterium salinarumArchaeaEuryarchaeotaAerobe
MMDBm0001828Methanococcus aeolicusArchaeaEuryarchaeotaAnaerobe
MMDBm0001956Methanocella arvoryzaeArchaeaEuryarchaeota
MMDBm0001824Methanococcoides burtoniiArchaeaEuryarchaeotaAnaerobe
MMDBm0001818Methanocaldococcus jannaschiiArchaeaEuryarchaeotaAnaerobe
MMDBm0001838Methanopyrus kandleriArchaeaEuryarchaeotaAnaerobe
MMDBm0001826Methanococcus maripaludisArchaeaEuryarchaeotaAnaerobe
MMDBm0001830Methanococcus maripaludisArchaeaEuryarchaeotaAnaerobe
MMDBm0001829Methanococcus maripaludisArchaeaEuryarchaeotaAnaerobe
MMDBm0001825Methanococcus maripaludisArchaeaEuryarchaeotaAnaerobe
MMDBm0001849Methanothermobacter thermautotrophicusArchaeaEuryarchaeotaAnaerobe
MMDBm0001827Methanococcus vannieliiArchaeaEuryarchaeotaAnaerobe
MMDBm0001948Nitrosopumilus maritimusArchaeaThaumarchaeotaAerobe
MMDBm0001955Picrophilus torridusArchaeaEuryarchaeotaAerobe
MMDBm0002386Prosthecochloris aestuariiEubacteriaChlorobiAnaerobe
MMDBm0002423Pyrococcus abyssiArchaeaEuryarchaeotaAnaerobe
MMDBm0002425Pyrococcus furiosusArchaeaEuryarchaeotaAnaerobe
MMDBm0002424Pyrococcus horikoshiiArchaeaEuryarchaeotaAnaerobe
MMDBm0002701Thermoplasma acidophilumArchaeaEuryarchaeotaFacultative anaerobe
MMDBm0002690Thermococcus kodakarensisArchaeaEuryarchaeotaAnaerobe
MMDBm0002693Thermococcus sibiricusArchaeaEuryarchaeotaAnaerobic
MMDBm0002702Thermoplasma volcaniumArchaeaEuryarchaeotaFacultative anaerobe
MMDBm0001953Archaeoglobus fulgidusArchaeaEuryarchaeotaAnaerobe
MMDBm0001843Methanosarcina acetivoransArchaeaEuryarchaeotaAnaerobe
MMDBm0001844Methanosarcina mazeiArchaeaEuryarchaeotaAnaerobe
MMDBm0001953Archaeoglobus fulgidusArchaeaEuryarchaeotaAnaerobe
MMDBm0001843Methanosarcina acetivoransArchaeaEuryarchaeotaAnaerobe
MMDBm0001844Methanosarcina mazeiArchaeaEuryarchaeotaAnaerobe
MMDBm0001198Aeromonas hydrophilaEubacteriaProteobacteriaFacultative aerobe
MMDBm0001197Aeromonas salmonicidaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001212Alkalilimnicola ehrlichiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000028Bacillus haloduransEubacteriaFirmicutesFacultative aerobe
MMDBm0000460Bacillus anthracisEubacteriaFirmicutes
MMDBm0001252Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0000046Bacteroides fragilisEubacteriaBacteroidetesAnaerobe
MMDBm0000047Bacteroides fragilisEubacteriaBacteroidetesAnaerobe
MMDBm0001248Bacillus subtilisEubacteriaFirmicutesFacultative aerobe
MMDBm0000055thetaiotaomicronEubacteriaBacteroidetesAnaerobe
MMDBm0001980Chromobacterium violaceumEubacteriaProteobacteriaFacultatively anaerobe
MMDBm0001647Geobacter bemidjiensisEubacteriaProteobacteriaAnaerobe
MMDBm0001524Deinococcus radiodurans EubacteriaDeinococcus-thermusAerobe
MMDBm0542442Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001592Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000162Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0541555Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000167Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001648Geobacter sp. FRC-32EubacteriaProteobacteriaAnaerobe
MMDBm0001646Geobacter lovleyiEubacteriaProteobacteriaAnaerobe
MMDBm0001644Geobacter metallireducensEubacteriaProteobacteriaAnaerobe
MMDBm0001968Geobacter sulfurreducensEubacteriaProteobacteriaAnaerobe
MMDBm0001649Geobacter sp. M21EubacteriaProteobacteriaAnaerobe
MMDBm0001645Geobacter uraniireducensEubacteriaProteobacteriaMicroaerophilic
MMDBm0001652Gloeobacter violaceusEubacteriaCyanobacteria
MMDBm0001383Candidatus Hamiltonella defensaEubacteriaProteobacteria
MMDBm0001728Klebsiella pneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001801Marinobacter nauticusEubacteriaProteobacteriaFacultative
MMDBm0001930Neisseria meningitidisEubacteriaProteobacteriaAerobe
MMDBm0001929Neisseria meningitidisEubacteriaProteobacteriaAerobe
MMDBm0001959Nostoc sp. PCC 7120EubacteriaCyanobacteriaAerobe
MMDBm0002659Synechococcus sp. WH 8102EubacteriaCyanobacteriaFacultative
MMDBm0002345Pasteurella multocidaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002353Pelobacter carbinolicusEubacteriaProteobacteriaAnaerobe
MMDBm0002361Photorhabdus luminescensEubacteriaProteobacteriaFacultative
MMDBm0000057Bacteroides vulgatusEubacteriaBacteroidetesAnaerobe
MMDBm0002380Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002381Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002379Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002377Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002375Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002371Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002387Proteus mirabilisEubacteriaProteobacteriaAerobe
MMDBm0002372Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002373Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002376Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002391Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0002392Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0002394Pseudomonas syringaeEubacteriaProteobacteriaAerobe
MMDBm0002448Rhodopirellula balticaEubacteriaPlanctomycetesAerobe
MMDBm0002498Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0548594Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002499Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002496Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002495Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002046Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0550587Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0550758Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002492Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002515Shewanella amazonensisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002527Shewanella balticaEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002517Shewanella balticaEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002520Shewanella balticaEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002523Shewanella balticaEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002510Shewanella denitrificansEubacteriaProteobacteriaFacultative
MMDBm0002513Shewanella frigidimarinaEubacteriaProteobacteriaFacultative
MMDBm0002524Shewanella halifaxensisEubacteriaProteobacteriaFacultative
MMDBm0002518Shewanella loihicaEubacteriaProteobacteriaFacultative
MMDBm0002509Shewanella oneidensisEubacteriaProteobacteriaFacultative
MMDBm0002522Shewanella pealeanaEubacteriaProteobacteriaFacultative
MMDBm0002519Shewanella putrefaciensEubacteriaProteobacteriaFacultative
MMDBm0002526Shewanella piezotoleransEubacteriaProteobacteriaFacultative
MMDBm0002514Shewanella sp. ANA-3EubacteriaProteobacteriaFacultative
MMDBm0002521Shewanella sediminisEubacteriaProteobacteriaFacultative
MMDBm0002512Shewanella sp. MR-4EubacteriaProteobacteriaFacultative
MMDBm0002511Shewanella sp. MR-7EubacteriaProteobacteriaFacultative
MMDBm0002516Shewanella sp. W3-18-1EubacteriaProteobacteriaFacultative
MMDBm0002525Shewanella woodyiEubacteriaProteobacteriaFacultative
MMDBm0002534Shigella flexneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000368Shigella flexneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002709Thermosynechococcus elongatusEubacteriaCyanobacteria
MMDBm0002722Tolumonas auensisEubacteriaProteobacteriaFacultative
MMDBm0002739Vibrio choleraeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002741Vibrio parahaemolyticusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002740Vibrio vulnificusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002742Vibrio vulnificusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001972Xanthomonas citriEubacteriaProteobacteriaAerobe
MMDBm0002761Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0002774Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002771Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002773Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002772Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0562461Yersinia pestisEubacteriaProteobacteria
MMDBm0882069Synechocystis sp. PCC 6803Eubacteria
MMDBm0882069Synechocystis sp. PCC 6803Eubacteria
MMDBm0002667Synechococcus sp. RCC307EubacteriaCyanobacteriaFacultative