| MMDBm0001183 | Acinetobacter sp. ADP1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001194 | Actinobacillus pleuropneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001193 | Actinobacillus pleuropneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001192 | Actinobacillus succinogenes | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001205 | Alcanivorax borkumensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001212 | Alkalilimnicola ehrlichii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001247 | Azotobacter vinelandii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001990 | Baumannia cicadellinicola | Eubacteria | Proteobacteria | |
| MMDBm0001378 | Candidatus Blochmannia floridanus | Eubacteria | Proteobacteria | |
| MMDBm0001379 | Candidatus Blochmannia pennsylvanicus | Eubacteria | Proteobacteria | |
| MMDBm0001294 | avium | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001964 | Bordetella bronchiseptica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001965 | Bordetella parapertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001293 | Bordetella petrii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001966 | Bordetella pertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001322 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001980 | Chromobacterium violaceum | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0001450 | Citrobacter koseri | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0001588 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001594 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001598 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001600 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001592 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001601 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001599 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001597 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001602 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001591 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001589 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001587 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001586 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001590 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001595 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001593 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000167 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000169 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001565 | Edwardsiella ictaluri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001571 | Enterobacter sp. 638 | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001596 | Escherichia fergusonii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001653 | Gluconacetobacter diazotrophicus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001654 | Gluconobacter oxydans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001665 | Hahella chejuensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002720 | Thiomicrospira crunogena | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001284 | succiniciproducens | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001865 | Methylococcus capsulatus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001855 | Methylobacillus flagellatus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001932 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001930 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001929 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001931 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001945 | Nitrosomonas eutropha | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001977 | Nitrosomonas europaea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001949 | Nitrosospira multiformis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001942 | Nitrosococcus oceani | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002361 | Photorhabdus luminescens | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002360 | Photobacterium profundum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002395 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002389 | Pseudoalteromonas atlantica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002404 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002407 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002399 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002398 | Pseudomonas entomophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002393 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002402 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002401 | mendocina | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002403 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002397 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002392 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002406 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002394 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002388 | Pseudoalteromonas haloplanktis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002396 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002400 | Stutzerimonas stutzeri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002415 | Psychrobacter arcticus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002416 | Psychrobacter cryohalolentis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002418 | Psychromonas ingrahamii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002417 | Psychrobacter sp. PRwf-1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001993 | Candidatus Ruthia magnifica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002487 | Saccharophagus degradans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002498 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0547793 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0548594 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002499 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0549171 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002500 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002496 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002495 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550379 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002046 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550426 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550377 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550587 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550758 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002535 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002533 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002532 | Shigella dysenteriae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002534 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001987 | Sodalis glossinidius | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0002719 | Thiobacillus denitrificans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002246 | Thioalkalivibrio sp. HL-EbGR7 | Eubacteria | Proteobacteria | |
| MMDBm0002722 | Tolumonas auensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001995 | Candidatus Vesicomyosocius okutanii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002774 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002771 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002773 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002772 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002780 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562461 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002045 | Zymomonas mobilis | Eubacteria | Proteobacteria | |
| MMDBm0001198 | Aeromonas hydrophila | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001197 | Aeromonas salmonicida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001501 | Cronobacter sakazakii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001680 | Halorhodospira halophila | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001727 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002346 | Pectobacterium atrosepticum | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002506 | Serratia proteamaculans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002783 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002779 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002782 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002778 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001198 | Aeromonas hydrophila | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001197 | Aeromonas salmonicida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001501 | Cronobacter sakazakii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001680 | Halorhodospira halophila | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001727 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002346 | Pectobacterium atrosepticum | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002506 | Serratia proteamaculans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002783 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002779 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002782 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002778 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001198 | Aeromonas hydrophila | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0802149 | | Eubacteria | Firmicutes | |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0002342 | Paracoccus denitrificans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001845 | Methanosarcina barkeri | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0881990 | Methanobacterium ivanovii | Archaea | | |
| MMDBm0001818 | Methanocaldococcus jannaschii | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0000463 | Bacillus megaterium | Eubacteria | Firmicutes | Aerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000332 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |
| MMDBm0449773 | Sinorhizobium sp. | Eubacteria | Proteobacteria | |
| MMDBm0002663 | Synechococcus elongatus | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0882069 | Synechocystis sp. PCC 6803 | Eubacteria | | |
| MMDBm0098378 | Saccharomyces cerevisiae | Fungi | Ascomycota | |