MiMeDB: Methanosarcina barkeri str. Fusaro (MMDBm0001845)

Microbe Identification

Microbe name

Methanosarcina barkeri str. Fusaro

NCBI Taxonomy ID

269797

Microbe Taxonomy

Superkingdom

Archaea

Kingdom

Archaea

Phylum

Euryarchaeota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Species

barkeri

Strain

Fusaro

Microbe Properties

Gram staining properties

Positive

Shape

Cocci

Mobility

Flagellar presence

Not Available

Number of membranes

Oxygen preference

Anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

Multiple

Biotic relationship

Free living

Cell arrangement

Singles

Sporulation

Singles

Metabolism

Methanogen - Cellulose degrader

Energy source

Lithotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012860	(2R)-2-phosphoglyceric acid	Water	Enolase	Enolization	RHEA	34755880
MMDBr0012876	Deoxyuridine triphosphate	diphosphate	Probable deoxyuridine 5'-triphosphate nucleotidohydrolase	Dephosphorylation; Hydrolysis of bond	RHEA	34755880
MMDBr0012883	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012884	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012954	Adenosine triphosphate	Argininosuccinic acid	Argininosuccinate synthase	Synthesis	RHEA	34755880
MMDBr0012970	D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Imidazoleglycerol-phosphate dehydratase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0013001	Acetic acid	Acetyl phosphate	Acetate kinase	Transfer of a formyl group	RHEA	34755880
MMDBr0013026	Hydrogen Ion	Carbon dioxide	Orotidine 5'-phosphate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0013027	Adenosine triphosphate	ADP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013038	diphosphate	Phosphoribosyl pyrophosphate	Tryptophan biosynthesis protein TrpCD	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013040	Water	Hydrogen Ion	L-aspartate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013041	Water	Hydrogen Ion	L-aspartate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013127	coenzyme B	coenzyme M-coenzyme B heterodisulfide	Methyl-coenzyme M reductase subunit alpha	Reduction	RHEA	34755880
MMDBr0013128	coenzyme B	coenzyme M-coenzyme B heterodisulfide	Methyl-coenzyme M reductase subunit alpha	Reduction	RHEA	34755880
MMDBr0013170	Adenosine monophosphate	ADP	Adenylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013179	Adenosine triphosphate	ADP	Replicase large subunit	Synthesis of a primer	RHEA	34755880
MMDBr0013194	Water	Hydroxymethylbilane	Porphobilinogen deaminase	Deamination	RHEA	34755880
MMDBr0013221	(R)-2,3-Dihydroxy-3-methylpentanoate	(S)-2-ethyl-2-hydroxy-3-oxobutanoic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0013226	Adenosine triphosphate	ADP	Putative thymidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013295	(S)-4-Amino-5-oxopentanoate	5-Aminolevulinic acid	Glutamate-1-semialdehyde 2,1-aminomutase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0013303	alpha-Ketoglutarate	3-Phosphonatooxypyruvate(3-)	Phosphoserine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0013333	Adenosine triphosphate	ADP	Protein ARG5,6, mitochondrial	Phosphorylation	RHEA	34755880
MMDBr0013370	Adenosine triphosphate	ADP	Glutamate 5-kinase	Phosphorylation	RHEA	34755880
MMDBr0013431	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	Isomerization	RHEA	34755880
MMDBr0013445	NAD	Hydrogen Ion	Siroheme synthase	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0013458	Guanosine triphosphate	Guanosine diphosphate	Adenylosuccinate synthetase	Synthesis	RHEA	34755880
MMDBr0013469	Co-sirohydrochlorin	Cobalt	Sirohydrochlorin cobaltochelatase	Chelation	RHEA	34755880
MMDBr0013470	(2R)-2-phosphoglyceric acid	(2R)-3-phosphoglyceric acid	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013489	adenosylcob(III)inamide-GDP	coenzyme B12	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0013544	alpha-Ketoglutarate	(R)-3-hydroxy-2-oxo-4-phosphooxybutanoic acid	Phosphoserine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0013547	Adenosine triphosphate	ADP	CTP synthase	Synthesis	RHEA	34755880
MMDBr0013633	Adenosine triphosphate	diphosphate	Probable FAD synthase	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0013655	5-Phosphoribosylamine	ADP	Phosphoribosylamine--glycine ligase	Ligation	RHEA	34755880
MMDBr0013681	NADP(+)	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013708	diphosphate	Phosphoribosyl pyrophosphate	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of phosphoribosyl group; Synthesis	RHEA	34755880
MMDBr0013719	5,6,7,8-Tetrahydromethanopterin	Methanofuran	Formyltransferase/hydrolase complex subunit D	Transfer of a formyl group	RHEA	34755880
MMDBr0013726	coenzyme B	coenzyme M-coenzyme B heterodisulfide	Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D	Reduction	RHEA	34755880
MMDBr0013728	(2E,6E,10E)-geranylgeranyl diphosphate	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	Digeranylgeranylglyceryl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0013773	1-(5-phosphoribosyl)-ATP	Phosphoribosyl pyrophosphate	ATP phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013784	D-Glyceraldehyde 3-phosphate	Dihydroxyacetone phosphate	Bifunctional PGK/TIM	Isomerization	RHEA	34755880
MMDBr0013792	Adenosine triphosphate	ADP	NAD kinase	Phosphorylation	RHEA	34755880
MMDBr0013833	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	Hydrogen Ion	Methenyltetrahydromethanopterin cyclohydrolase	Hydrolysis	RHEA	34755880
MMDBr0013840	Hydrogen Ion	12,18-didecarboxysiroheme	Siroheme decarboxylase alpha subunit	Decarboxylation	RHEA	34755880
MMDBr0013884	Hydrogen Ion	beta-Alanine	L-aspartate decarboxylase dtxS4	Decarboxylation	RHEA	34755880
MMDBr0013886	Carbamoylphosphate	Hydrogen Ion	Ornithine carbamoyltransferase	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013895	L-Glutamic-gamma-semialdehyde	Hydrogen Ion	Gamma-glutamyl phosphate reductase	Reduction	RHEA	34755880
MMDBr0013921	(R)-4'-phosphopantetheine	3'-dephospho-CoA	Phosphopantetheine adenylyltransferase	Dephosphorylation	RHEA	34755880
MMDBr0013946	Carbamoylphosphate	Hydrogen Ion	Protein pyrABCN	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013952	1-(5-phosphoribosyl)-5'-AMP	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	Histidine biosynthesis bifunctional protein HisIE	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0013978	Hydrogen peroxide	Water	Bromoperoxidase-catalase	Synthesis	RHEA	34755880
MMDBr0014024	Hydrogen Ion	Ammonium	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014025	Hydrogen Ion	Ammonium	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014061	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Chorismate	Chorismate synthase	Synthesis	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0014091	Adenosine triphosphate	diphosphate	Nicotinamide-nucleotide adenylyltransferase	Synthesis	RHEA	34755880
MMDBr0014102	NAD	Dihydroxyacetone phosphate	Glycerol-1-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0014103	NADP(+)	Dihydroxyacetone phosphate	Glycerol-1-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0014105	(S)-malate(2-)	Hydrogen Ion	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014117	N-Acetyl-L-glutamate 5-semialdehyde	Hydrogen Ion	Protein ARG5,6, mitochondrial	Reduction	RHEA	34755880
MMDBr0014167	(R)-2,3-Dihydroxy-isovalerate	(2S)-2-acetolactic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0014193	2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate	diphosphate	Probable thiamine biosynthetic bifunctional enzyme	Synthesis	RHEA	34755880
MMDBr0014229	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	(2S)-2-[5-Amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinic acid	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Synthesis	RHEA	34755880
MMDBr0014251	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	5,10-Methenyltetrahydrofolate	C-1-tetrahydrofolate synthase, cytoplasmic	Synthesis	RHEA	34755880
MMDBr0014256	1-(5-phosphoribosyl)-ATP	1-(5-phosphoribosyl)-5'-AMP	Phosphoribosyl-ATP pyrophosphatase	Dephosphorylation; Synthesis	RHEA	34755880
MMDBr0014282	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	5-Aminoimidazole ribonucleotide	Bifunctional purine biosynthetic protein ADE5,7	Ligation	RHEA	34755880
MMDBr0014295	(2R)-3-phosphoglyceric acid	Carbon dioxide	Ribulose bisphosphate carboxylase large chain	Carboxylation	RHEA	34755880
MMDBr0014311	Isopentenyl pyrophosphate	Dimethylallylpyrophosphate	Isopentenyl-diphosphate Delta-isomerase	Isomerization	RHEA	34755880
MMDBr0014327	(2E,6E,10E)-geranylgeranyl diphosphate	diphosphate	Geranylgeranylglyceryl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0014333	alpha-D-Glucosamine 1-phosphate	D-glucosamine 6-phosphate	Phosphoglucosamine mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0014353	adenosylcob(III)inamide-GDP	adenosylcob(III)alamin 5'-phosphate	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0014367	Adenine	Hypoxanthine	Adenine deaminase	Deamination	RHEA	34755880
MMDBr0014369	5,10-Methenyltetrahydrofolate	(6S)-10-formyltetrahydrofolic acid	C-1-tetrahydrofolate synthase, cytoplasmic	Reversible cyclization	RHEA	34755880
MMDBr0014377	alpha-Ketoglutarate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Histidinol-phosphate aminotransferase	Amine group addition	RHEA	34755880
MMDBr0014407	Argininosuccinic acid	fumarate	Bifunctional protein ArgHA	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014426	4-Methyl-5-(2-hydroxyethyl)-thiazole	4-methyl-5-(2-phosphooxyethyl)-thiazole	Probable thiamine biosynthetic bifunctional enzyme	Phosphorylation	RHEA	34755880
MMDBr0014447	Adenosine triphosphate	ADP	UMP-CMP kinase	Phosphorylation	RHEA	34755880
MMDBr0014449	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014450	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014453	Hydrogen	dihydromethanophenazine	F(420)H(2) dehydrogenase subunit A	Dehydrogenation	RHEA	34755880
MMDBr0014454	Adenosine triphosphate	ADP	Phosphate-import ATP-binding protein PhnC	Transport	RHEA	34755880
MMDBr0014474	5,6,7,8-Tetrahydromethanopterin	5,10-Methylenetetrahydromethanopterin	5,6,7,8-tetrahydromethanopterin hydro-lyase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014486	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014487	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014491	AICAR	Phosphoribosyl formamidocarboxamide	5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase	Synthesis	RHEA	34755880
MMDBr0017917	5-Aminoimidazole ribonucleotide	4-Amino-2-methyl-5-phosphomethylpyrimidine	Phosphomethylpyrimidine synthase	Synthesis	RHEA	34755880
MMDBr0014504	Cytidine triphosphate	CDP	Riboflavin kinase	Phosphorylation	RHEA	34755880
MMDBr0014505	Hydrogen Ion	Ammonium	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014506	Hydrogen Ion	Ammonium	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014514	Adenosine triphosphate	ADP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0014522	D-Ribulose 5-phosphate	D-arabino-hex-3-ulose 6-phosphate	Bifunctional enzyme Fae/Hps	Synthesis	RHEA	34755880
MMDBr0014556	diphosphate	Phosphoribosyl pyrophosphate	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0014574	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol	CDP-archaeol synthase	Synthesis	RHEA	34755880
MMDBr0014591	Guanosine triphosphate	7,8-dihydroneopterin 2',3'-cyclic phosphate	GTP cyclohydrolase MptA	Hydrolysis	RHEA	34755880
MMDBr0014596	Dihydroxyacetone phosphate	Hydrogen Ion	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0014597	Dihydroxyacetone phosphate	Hydrogen Ion	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0014601	2-amino-2,3,7-trideoxy-D-lyxo-hept-6-ulosonate	3-Dehydroquinate	3-dehydroquinate synthase	Synthesis	RHEA	34755880
MMDBr0014610	cobalt(+)	methyl-Co(2+)	Monomethylamine methyltransferase MtmB	Methylation	RHEA	34755880
MMDBr0014619	L-3,4-Dihydroxybutan-2-one 4-phosphate	6,7-Dimethyl-8-(1-D-ribityl)lumazine	6,7-dimethyl-8-ribityllumazine synthase	Synthesis	RHEA	34755880
MMDBr0014633	Co-precorrin-5B	Co-precorrin-6A	Cobalt-precorrin-5B C(1)-methyltransferase	Methylation	RHEA	34755880
MMDBr0017923	Adenosine triphosphate	ADP	Cobyrinate a,c-diamide synthase	Synthesis	RHEA	34755880
MMDBr0017926	Adenosine triphosphate	ADP	CTP synthase	Synthesis	RHEA	34755880
MMDBr0014649	Hydrogen Ion	3-Sulfo-L-alanine	Cysteate synthase	Synthesis	RHEA	34755880
MMDBr0014718	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014719	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014763	7-Deaza-7-carboxyguanine	7-Cyano-7-carbaguanine	7-cyano-7-deazaguanine synthase	Synthesis	RHEA	34755880
MMDBr0014821	Oxalacetic acid	Hydrogen carbonate	Phosphoenolpyruvate carboxylase	Carboxylation	RHEA	34755880
MMDBr0014846	Thymidine 5'-triphosphate	diphosphate	dTTP/UTP pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014908	Water	diphosphate	dTTP/UTP pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014995	Guanosine triphosphate	Guanosine diphosphate	Coenzyme F420:L-glutamate ligase	Ligation	RHEA	34755880
MMDBr0014997	Guanosine triphosphate	Guanosine diphosphate	Coenzyme F420:L-glutamate ligase	Ligation	RHEA	34755880
MMDBr0017950	aldehydo-D-ribose 5-phosphate	Hydrogen Ion	Pyridoxal 5'-phosphate synthase subunit PDX1	Synthesis	RHEA	34755880
MMDBr0015149	S-Adenosylmethionine	Hydrogen Ion	Siroheme synthase	Methylation; Synthesis	RHEA	34755880
MMDBr0015175	L-Lysine	(3R)-3-methyl-D-ornithine	3-methylornithine synthase	Synthesis	RHEA	34755880
MMDBr0015176	(3R)-3-methyl-D-ornithine	(3R)-3-methyl-D-ornithyl-N(6)-L-lysine	3-methyl-D-ornithine--L-lysine ligase	Ligation	RHEA	34755880
MMDBr0015177	(3R)-3-methyl-D-ornithine	(3R)-3-methyl-D-ornithyl-N(6)-L-lysine	3-methyl-D-ornithine--L-lysine ligase	Ligation	RHEA	34755880
MMDBr0015316	L-Aspartate-semialdehyde	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate synthase	Synthesis	RHEA	34755880
MMDBr0015402	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015405	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015518	D-Ribulose 1,5-bisphosphate	(2R)-3-phosphoglyceric acid	Ribulose bisphosphate carboxylase large chain	Carboxylation	RHEA	34755880
MMDBr0015547	Adenosine monophosphate	Adenine	AMP phosphorylase 1	Phosphorylation	RHEA	34755880
MMDBr0015548	CMP	Ribose 1,5-bisphosphate	AMP phosphorylase 1	Phosphorylation	RHEA	34755880
MMDBr0015549	Phosphate	Ribose 1,5-bisphosphate	AMP phosphorylase 1	Phosphorylation	RHEA	34755880
MMDBr0015695	cobalt(+)	Dimethylamine	Trimethylamine methyltransferase MttB	Methylation	RHEA	34755880
MMDBr0015773	cobalt(+)	methyl-Co(2+)	Dimethylamine methyltransferase MtbB1	Methylation	RHEA	34755880
MMDBr0015878	5'-Deoxyadenosine	5'-deoxyinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0015879	5'-Deoxyadenosine	5'-deoxyinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0015910	D-Glyceraldehyde 3-phosphate	4-(hydroxymethyl)-2-furancarboxaldehyde phosphate	(5-formylfuran-3-yl)methyl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0016123	5-hydroxybenzimidazolylcob(I)amide	Water	Methanol--corrinoid protein co-methyltransferase	Methylation	RHEA	34755880
MMDBr0016124	Mesna	5-hydroxybenzimidazolylcob(I)amide	Methylcobamide:CoM methyltransferase MtaA	Methylation	RHEA	34755880
MMDBr0016358	2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate	Carbon dioxide	Probable thiamine biosynthetic bifunctional enzyme	Synthesis	RHEA	34755880
MMDBr0016359	2-(2-Carboxy-4-methylthiazol-5-yl)ethyl phosphate	Carbon dioxide	Probable thiamine biosynthetic bifunctional enzyme	Synthesis	RHEA	34755880
MMDBr0016547	archaetidylserine	archaetidylethanolamine	Putative archaetidylserine decarboxylase proenzyme	Decarboxylation	RHEA	34755880
MMDBr0016628	Hydrogen Ion	Nickel	Sirohydrochlorin cobaltochelatase	Chelation	RHEA	34755880
MMDBr0017985	Adenosine triphosphate	ADP	Cobyrinate a,c-diamide synthase	Synthesis	RHEA	34755880
MMDBr0016639	15,17(3)-seco-F430-17(3)-acid	ADP	Coenzyme F(430) synthetase	Synthesis	RHEA	34755880
MMDBr0016659	5-Methyl-5,6,7,8-tetrahydromethanopterin	5,6,7,8-Tetrahydromethanopterin	Tetrahydromethanopterin S-methyltransferase subunit A	Methylation	RHEA	34755880
MMDBr0017987	5-amino-6-(D-ribitylamino)uracil	2-iminoacetate	5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase	Synthesis	RHEA	34755880
MMDBr0017988	5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil	5'-Deoxyadenosine	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase	Synthesis	RHEA	34755880
MMDBr0016807	Glycine	ADP-5-ethyl-4-methylthiazole-2-carboxylate	Thiamine thiazole synthase	Synthesis	RHEA	34755880
MMDBr0017992	Fe-coproporphyrin III	5'-Deoxyadenosine	AdoMet-dependent heme synthase	Synthesis	RHEA	34755880
MMDBr0016907	Adenosine triphosphate	ADP	ATP synthase subunit alpha	ATP hydrolysis; Synthesis	RHEA	34755880
MMDBr0017101	3'-dephospho-CoA	CoA	GTP-dependent dephospho-CoA kinase	Phosphorylation	RHEA	34755880
MMDBr0017356	(2S)-2-phospholactic acid	(2S)-lactyl-2-diphospho-5'-guanosine	2-phospho-L-lactate guanylyltransferase	Transfer of a GMP	RHEA	34755880
MMDBr0017362	(2S)-lactyl-2-diphospho-5'-guanosine	GMP	2-phospho-L-lactate transferase	Transfer of the 2-phospholactate moiety	RHEA	34755880
MMDBr0017834	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	D-Glyceraldehyde 3-phosphate	Tryptophan synthase	Synthesis	RHEA	34755880
MMDBr0017843	Adenosine triphosphate	Adenosine monophosphate	GMP synthase [glutamine-hydrolyzing]	Synthesis	RHEA	34755880
MMDBr0017863	Hydrogen Ion	Carbon dioxide	Probable L-tyrosine/L-aspartate decarboxylase	Carboxylation	RHEA	34755880
MMDBr0017871	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Serine hydroxymethyltransferase	Methylation	RHEA	34755880
MMDBr0017874	Water	L-Glutamic acid	Thermolabile glutaminase	Synthesis	RHEA	34755880
MMDBr0017879	Adenosine triphosphate	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	Phosphoribosylformylglycinamidine synthase	Synthesis	RHEA	34755880
MMDBr0017882	Adenosine triphosphate	ADP	Carbamoyl-phosphate synthase small chain	Synthesis	RHEA	34755880
MMDBr0017894	Water	Hydrogen Ion	Histidinol dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0017897	Adenosine triphosphate	diphosphate	S-adenosylmethionine synthase	Synthesis	RHEA	34755880
MMDBr0017916	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	AICAR	Imidazole glycerol phosphate synthase subunit HisH	Synthesis	RHEA	34755880
MMDBr0024345	Adenosine triphosphate	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024360	Adenosine triphosphate	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024368	Adenosine triphosphate	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024389	Adenosine triphosphate	diphosphate	Leucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024411	Adenosine triphosphate	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024415	(S)-4-Amino-5-oxopentanoate	Hydrogen Ion	Glutamyl-tRNA reductase	Reduction	RHEA	34755880
MMDBr0024418	Adenosine triphosphate	diphosphate	Alanine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024429	Pyruvic acid	Hydrogen Ion	Pyruvate synthase subunit PorB	Redox reaction; Synthesis	RHEA	34755880
MMDBr0024449	Adenosine triphosphate	diphosphate	Methionine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024474	Adenosine triphosphate	diphosphate	Proline--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024477	Adenosine triphosphate	diphosphate	CCA-adding enzyme	Synthesis and repair of 3'-terminal CCA sequence of tRNA	RHEA	34755880
MMDBr0024483	Water	Hydrogen Ion	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024533	Water	Ammonium	Probable chemoreceptor glutamine deamidase CheD	Deamidation	RHEA	34755880
MMDBr0024568	Water	Hydrogen Ion	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024578	Adenosine triphosphate	diphosphate	Cysteine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024586	L-Serine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0024590	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0024597	L-Aspartic acid	diphosphate	Aspartate--tRNA(Asp/Asn) ligase	Ligation	RHEA	34755880
MMDBr0024626	Adenosine triphosphate	diphosphate	Pyrrolysine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024628	Adenosine triphosphate	Hydrogen Ion	Phenylalanine--tRNA ligase beta subunit	Ligation	RHEA	34755880
MMDBr0024639	Water	Hydrogen Ion	Molybdenum-containing formylmethanofuran dehydrogenase 1 subunit C	Dehydrogenation	RHEA	34755880
MMDBr0024656	Adenosine triphosphate	diphosphate	Arginine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024666	Adenosine triphosphate	diphosphate	Lysine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024671	Water	Hydrogen Ion	Acetyl-CoA decarbonylase/synthase complex subunit alpha	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0024674	Hydrogen Ion	5,10-Methylenetetrahydromethanopterin	5,10-methylenetetrahydromethanopterin reductase	Reduction	RHEA	34755880
MMDBr0024745	L-Glutamic acid	diphosphate	Glutamate--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024759	Adenosine triphosphate	diphosphate	RNA 3'-terminal phosphate cyclase	Cycle formation	RHEA	34755880
MMDBr0024768	Water	L-Cysteine	Peptide methionine sulfoxide reductase MsrB	Reduction	RHEA	34755880
MMDBr0024787	Adenosine triphosphate	Hydrogen Ion	Threonine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024797	Adenosine triphosphate	diphosphate	O-phosphoserine--tRNA(Cys) ligase	Ligation	RHEA	34755880
MMDBr0024798	Hydrogen Ion	Phosphate	O-phospho-L-seryl-tRNA:Cys-tRNA synthase	Synthesis	RHEA	34755880
MMDBr0024950	Tetra-mu3-sulfido-tetrairon(2+)	Hydrogen Ion	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0024951	Hydrogen Ion	Tetra-mu3-sulfido-tetrairon(2+)	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0024956	S-Adenosylmethionine	Hydrogen Ion	Diphthine synthase	Synthesis	RHEA	34755880
MMDBr0024971	L-Threonylcarbamoyladenylate	Hydrogen Ion	tRNA N6-adenosine threonylcarbamoyltransferase	Synthesis	RHEA	34755880
MMDBr0024980	S-Adenosylmethionine	Hydrogen Ion	Fe-coproporphyrin III synthase	Synthesis	RHEA	34755880
MMDBr0025060	Adenosine triphosphate	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0025075	S-Adenosylmethionine	Hydrogen Ion	Ribosomal RNA large subunit methyltransferase E	Methylation	RHEA	34755880
MMDBr0025114	S-Adenosylmethionine	Hydrogen Ion	tRNA (cytidine(56)-2'-O)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025124	S-Adenosylmethionine	Hydrogen Ion	tRNA (guanine(26)-N(2))-dimethyltransferase	Methylation	RHEA	34755880
MMDBr0025130	7-Cyano-7-carbaguanine	Guanine	tRNA-guanine(15) transglycosylase	Glycosidic bond hydrolysis	RHEA	34755880
MMDBr0025193	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0025216	Hydrogen Ion	NAD	NAD(P)H dehydrogenase (quinone)	Dehydrogenation; Redox reaction; Reduction	RHEA	34755880
MMDBr0025217	Hydrogen Ion	NADP(+)	NAD(P)H dehydrogenase (quinone)	Dehydrogenation; Redox reaction; Reduction	RHEA	34755880
MMDBr0025237	L-Threonine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0025434	Water	Phosphate	Ni-sirohydrochlorin a,c-diamide reductive cyclase complex, component CfbD	Cycle formation	RHEA	34755880
MMDBr0025501	Tetra-mu3-sulfido-tetrairon(2+)	Hydrogen Ion	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0025502	Hydrogen Ion	Tetra-mu3-sulfido-tetrairon(2+)	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0025803	S-Adenosylmethionine	Hydrogen Ion	16S rRNA aminocarboxypropyltransferase	Transfer of an aminocarboxypropyl group	RHEA	34755880
MMDBr0026022	Adenosine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026023	Cytidine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026024	Uridine 5'-monophosphate	Uridine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026025	Guanosine monophosphate	Guanosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026046	Uridine 5'-diphosphate	Uridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026047	Uridine 5'-diphosphate	Cytidine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026048	Guanosine 3',5'-bis(diphosphate)	Guanosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026061	Cytidine triphosphate	Uridine 5'-diphosphate	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026062	Uridine triphosphate	Uridine 5'-diphosphate	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026063	Adenosine triphosphate	Adenosine diphosphate	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026064	Guanosine triphosphate	Guanosine 3',5'-bis(diphosphate)	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026085	Deoxyuridine-5'-diphosphate	Deoxyuridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026086	2'-Deoxycytidine 5'-diphosphate	Deoxycytidine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026087	2'-Deoxyadenosine 5'-diphosphate	Deoxyadenosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026088	2'-Deoxyguanosine 5'-diphosphate	2'-Deoxyguanosine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880

Genome Data

Genome Link

Not Available

Genome Length

Not Available

# Predicted Proteins

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

Reference

PMID: 17704766

Source Links

GenBank