Reaction Identification
Reaction IDMMDBr0024649
Reaction typeLigation
Sub-SystemNot Available
In non-microbes0
In microbes145
Data SourcesRHEA;
Metabolism
PrecursorReactionProduct
Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0001587Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002781Yersinia enterocoliticaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002418Psychromonas ingrahamiiEubacteriaProteobacteriaAnaerobe
MMDBm0002367Polynucleobacter necessariusEubacteriaProteobacteriaAerobe
MMDBm0002782Yersinia pestisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002400Stutzerimonas stutzeriEubacteriaProteobacteriaAerobe
MMDBm0001571Enterobacter sp. 638EubacteriaProteobacteriaFacultative anaerobe
MMDBm0002401mendocinaEubacteriaProteobacteriaAerobe
MMDBm0002743Vibrio choleraeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001458Clostridium kluyveriEubacteriaFirmicutesAnaerobe
MMDBm0001727Klebsiella pneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001192Actinobacillus succinogenesEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002783pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001501Cronobacter sakazakiiEubacteriaProteobacteriaAnaerobe
MMDBm0610847Vibrio campbelliiEubacteriaProteobacteria
MMDBm0001588Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001589Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001450Citrobacter koseriEubacteriaProteobacteriaFacultatively anaerobe
MMDBm0002506Serratia proteamaculansEubacteriaProteobacteriaFacultative
MMDBm0547793Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002046Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002784Yersinia pestisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002773Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0001590Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002785pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000167Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001591Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002368Polynucleobacter necessariusEubacteriaProteobacteriaAerobe
MMDBm0002786pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002535Shigella boydiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002430Ralstonia pickettiiEubacteriaProteobacteriaAerobe
MMDBm0001576tasmaniensisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001507Cupriavidus taiwanensisEubacteriaProteobacteriaFacultative
MMDBm0002387Proteus mirabilisEubacteriaProteobacteriaAerobe
MMDBm0002004Alteromonas mediterraneaEubacteriaProteobacteriaAerobe
MMDBm0002495Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002496Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0550587Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0550377Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002498Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001210Vibrio fischeriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002499Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0549171Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002500Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001728Klebsiella pneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001592Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001211Aliivibrio salmonicidaEubacteriaProteobacteriaFacultative
MMDBm0001593Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001600Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001596Escherichia fergusoniiEubacteriaProteobacteriaAerobe
MMDBm0001597Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001598Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001599Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001595Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001601Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001594Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002407Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0002745Vibrio splendidusEubacteriaProteobacteriaFacultative
MMDBm0001327Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0001326Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0550426Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001247Azotobacter vinelandiiEubacteriaProteobacteriaAerobe
MMDBm0002746Vibrio choleraeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001383Candidatus Hamiltonella defensaEubacteriaProteobacteria
MMDBm0002722Tolumonas auensisEubacteriaProteobacteriaFacultative
MMDBm0001602Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001565Edwardsiella ictaluriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002347Pectobacterium carotovorumEubacteriaProteobacteriaFacultative anaerobe
MMDBm0541555Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001658Haemophilus influenzaeEubacteriaProteobacteriaAerobe; facultative anaerobe
MMDBm0001524Deinococcus radiodurans EubacteriaDeinococcus-thermusAerobe
MMDBm0001929Neisseria meningitidisEubacteriaProteobacteriaAerobe
MMDBm0001930Neisseria meningitidisEubacteriaProteobacteriaAerobe
MMDBm0001322Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0002345Pasteurella multocidaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002399Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0001504Ralstonia eutrophaEubacteriaProteobacteriaFacultative aerobe
MMDBm0001477Clostridium perfringensEubacteriaFirmicutesAnaerobe
MMDBm0002534Shigella flexneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001586Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000132Clostridium perfringensEubacteriaFirmicutesAnaerobe
MMDBm0002389Pseudoalteromonas atlanticaEubacteriaProteobacteriaAerobe
MMDBm0000109Clostridioides difficileEubacteriaFirmicutesAnaerobe
MMDBm0002780Yersinia pestisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002779Yersinia pestisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001506Cupriavidus metalliduransEubacteriaProteobacteriaFacultative
MMDBm0001941Nitrobacter hamburgensisEubacteriaProteobacteriaAerobe
MMDBm0000169Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001294aviumEubacteriaProteobacteriaAerobe
MMDBm0001987Sodalis glossinidiusEubacteriaProteobacteriaMicroaerophilic
MMDBm0002765Xanthomonas oryzaeEubacteriaProteobacteriaAerobe
MMDBm0002533Shigella boydiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002532Shigella dysenteriaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002764Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0002388Pseudoalteromonas haloplanktisEubacteriaProteobacteriaAerobe
MMDBm0001940Nitrobacter winogradskyiEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002531Shigella sonneiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001479psychrerythraeaEubacteriaProteobacteriaFacultatively anaerobe
MMDBm0001659Haemophilus influenzaeEubacteriaProteobacteriaAerobe; facultative anaerobe
MMDBm0002763Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0548594Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001209Vibrio fischeriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001928Neisseria gonorrhoeaeEubacteriaProteobacteriaAerobe
MMDBm0002762Xanthomonas oryzaeEubacteriaProteobacteriaAerobe
MMDBm0550379Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001713Idiomarina loihiensisEubacteriaProteobacteriaAerobe
MMDBm0002778pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002346Pectobacterium atrosepticumEubacteriaProteobacteriaAnaerobe
MMDBm0002360Photobacterium profundumEubacteriaProteobacteriaFacultative
MMDBm0002742Vibrio vulnificusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002361Photorhabdus luminescensEubacteriaProteobacteriaFacultative
MMDBm0001980Chromobacterium violaceumEubacteriaProteobacteriaFacultatively anaerobe
MMDBm0002448Rhodopirellula balticaEubacteriaPlanctomycetesAerobe
MMDBm0001969Haemophilus ducreyiEubacteriaProteobacteriaAnaerobe
MMDBm0001966Bordetella pertussisEubacteriaProteobacteriaAerobe
MMDBm0001965Bordetella parapertussisEubacteriaProteobacteriaAerobe
MMDBm0001964Bordetella bronchisepticaEubacteriaProteobacteriaAerobe
MMDBm0001977Nitrosomonas europaeaEubacteriaProteobacteriaAerobe
MMDBm0000368Shigella flexneriEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002772Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002741Vibrio parahaemolyticusEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002394Pseudomonas syringaeEubacteriaProteobacteriaAerobe
MMDBm0002392Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0001324Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0001308Bradyrhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0002509Shewanella oneidensisEubacteriaProteobacteriaFacultative
MMDBm0000162Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001323Buchnera aphidicolaEubacteriaProteobacteria
MMDBm0002761Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0001972Xanthomonas citriEubacteriaProteobacteriaAerobe
MMDBm0542442Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001454Clostridium perfringensEubacteriaFirmicutesAnaerobe
MMDBm0002429Ralstonia solanacearumEubacteriaProteobacteriaAerobe
MMDBm0550758Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0562461Yersinia pestisEubacteriaProteobacteria
MMDBm0002492Salmonella entericaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002391Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0002739Vibrio choleraeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002771Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0158859Enterocytozoon bieneusiFungiMicrosporidia
MMDBm0158926Nosema ceranaeFungiMicrosporidia
MMDBm0060665Trichoderma virensFungiAscomycota
MMDBm0098378Saccharomyces cerevisiaeFungiAscomycota
MMDBm0159119Encephalitozoon cuniculiFungiMicrosporidia
MMDBm0101577Schizosaccharomyces pombeFungiAscomycota