MiMeDB: Vibrio cholerae M66-2 (MMDBm0002746)

Microbe Identification

Microbe name

Vibrio cholerae M66-2

NCBI Taxonomy ID

579112

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Species

cholerae

Strain

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Yes

Number of membranes

Oxygen preference

Facultative anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

Multiple

Biotic relationship

Free living

Cell arrangement

Singles

Sporulation

Singles

Metabolism

Not Available

Energy source

Heterotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human			Unknown

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012860	(2R)-2-phosphoglyceric acid	Phosphoenolpyruvic acid	Enolase	Enolization	RHEA	34755880
MMDBr0012867	(1R,6R)-6-Hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate	2-Succinylbenzoate	o-succinylbenzoate synthase	Racemization; Synthesis	RHEA	34755880
MMDBr0012889	Pyroglutamic acid	L-Glutamic acid	5-oxoprolinase	Hydrolysis	RHEA	34755880
MMDBr0012943	Xanthylic acid	Phosphoribosyl pyrophosphate	Xanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0012944	Phosphoribosyl pyrophosphate	Xanthylic acid	Xanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0012946	N2-Succinyl-L-glutamic acid 5-semialdehyde	N-Succinyl-L-glutamate	N-succinylglutamate 5-semialdehyde dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012953	(R)-Pantoate	Pantothenic acid	Pantothenate synthetase	Ligation; Phosphorylation; Synthesis	RHEA	34755880
MMDBr0012954	L-Aspartic acid	Argininosuccinic acid	Argininosuccinate synthase	Synthesis	RHEA	34755880
MMDBr0012971	beta-D-Fructose 1,6-bisphosphate	beta-D-Fructose 6-phosphate	Fructose-1,6-bisphosphatase/inositol-1-monophosphatase	Aldol addition (or reverse); Dephosphorylation	RHEA	34755880
MMDBr0012975	Glycerol 3-phosphate	Dihydroxyacetone phosphate	Glycerol-3-phosphate dehydrogenase [NAD(+)]	Dehydrogenation	RHEA	34755880
MMDBr0012976	Glycerol 3-phosphate	Dihydroxyacetone phosphate	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0012989	D-Alanine	D-Alanyl-D-alanine	D-alanine--D-alanine ligase	Ligation	RHEA	34755880
MMDBr0013026	Orotidylic acid	Uridine 5'-monophosphate	Orotidine 5'-phosphate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0013045	Alpha-D-glucose 6-phosphate	beta-D-Fructose 6-phosphate	Glucose-6-phosphate isomerase	Isomerization	RHEA	34755880
MMDBr0013046	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	3-methyl-2-oxobutanoate hydroxymethyltransferase	Methylation	RHEA	34755880
MMDBr0013062	(6R)-6-(l-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4a-hydroxypterin	4a-Carbinolamine tetrahydrobiopterin	Putative pterin-4-alpha-carbinolamine dehydratase	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0013081	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolic acid	7,8-dihydrofolate monoglutamate	Bifunctional dihydrofolate reductase-thymidylate synthase	Reduction; Synthesis	RHEA	34755880
MMDBr0013088	Glucosamine 6-phosphate	beta-D-Fructose 6-phosphate	D-galactosamine-6-phosphate deaminase AgaS	Deamination; Isomerization	RHEA	34755880
MMDBr0013134	D-Glyceraldehyde 3-phosphate	1-Deoxy-D-xylulose 5-phosphate	1-deoxy-D-xylulose-5-phosphate synthase	Synthesis	RHEA	34755880
MMDBr0013152	L-Glutamic acid	D-Glutamate	L-alanine/L-glutamate racemase	Racemization; Synthesis	RHEA	34755880
MMDBr0013162	Nitrate	Nitrite	Periplasmic nitrate reductase	Reduction	RHEA	34755880
MMDBr0013173	Uridine 5'-monophosphate	Phosphoribosyl pyrophosphate	Bifunctional protein PyrR	Transfer of phosphoribosyl group	RHEA	34755880
MMDBr0013183	Guanosine 3'-diphosphate 5'-triphosphate	Guanosine 3',5'-bis(diphosphate)	Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0013186	4-Imidazolone-5-propionic acid	Trans-urocanate	Urocanate hydratase	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0013214	Deoxycytidine	2'-Deoxyuridine	Cytidine deaminase	Deamination	RHEA	34755880
MMDBr0013221	(R)-2,3-Dihydroxy-3-methylpentanoate	(S)-2-ethyl-2-hydroxy-3-oxobutanoic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0013224	N-acetyl-alpha-D-glucosamine 1-phosphate	Uridine diphosphate-N-acetylglucosamine	Bifunctional protein GlmU	N-Acetylation; Phosphorylation; Isomerization	RHEA	34755880
MMDBr0013226	5-Thymidylic acid	dTDP	Putative thymidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013236	5'-Methylthioadenosine	5-Methylthioribose	Aminodeoxyfutalosine nucleosidase	Hydrolysis of a nucleotide	RHEA	34755880
MMDBr0013246	2-C-methyl-D-erythritol 4-phosphate	1-Deoxy-D-xylulose 5-phosphate	1-deoxy-D-xylulose 5-phosphate reductoisomerase	Isomerization	RHEA	34755880
MMDBr0013248	alpha-D-Glucosamine 1-phosphate	N-acetyl-alpha-D-glucosamine 1-phosphate	Bifunctional protein GlmU	N-Acetylation	RHEA	34755880
MMDBr0013274	L-Homoserine	O-Phosphohomoserine	Homoserine kinase	Phosphorylation	RHEA	34755880
MMDBr0013280	D-Arabinose 5-phosphate	3-deoxy-alpha-D-manno-2-octulosonate-8-phosphate	2-dehydro-3-deoxyphosphooctonate aldolase	Aldol addition (or reverse)	RHEA	34755880
MMDBr0013295	(S)-4-Amino-5-oxopentanoate	5-Aminolevulinic acid	Glutamate-1-semialdehyde 2,1-aminomutase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0013333	N-Acetylglutamic acid	N-Acetyl-L-glutamyl 5-phosphate	Protein ARG5,6, mitochondrial	Phosphorylation	RHEA	34755880
MMDBr0013339	aldehydo-D-ribose 5-phosphate	D-Ribulose 5-phosphate	Bifunctional ribokinase/ribose-5-phosphate isomerase A	Isomerization	RHEA	34755880
MMDBr0013390	3'-dephospho-CoA	2'-(5''-triphospho-alpha-D-ribosyl)-3'-dephospho-CoA	Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	Synthesis	RHEA	34755880
MMDBr0013395	Pyridoxine 5'-phosphate	Hydrogen peroxide	Probable pyridoxamine 5'-phosphate oxidase	Oxidation	RHEA	34755880
MMDBr0013397	N-Succinyl-L-glutamate	L-Glutamic acid	Succinylglutamate desuccinylase	Hydrolysis of carbon-nitrogen bond	RHEA	34755880
MMDBr0013458	Guanosine triphosphate	Guanosine diphosphate	Adenylosuccinate synthetase	Synthesis	RHEA	34755880
MMDBr0013466	Pyridoxamine 5'-phosphate	Hydrogen peroxide	Probable pyridoxamine 5'-phosphate oxidase	Oxidation	RHEA	34755880
MMDBr0013470	(2R)-2-phosphoglyceric acid	(2R)-3-phosphoglyceric acid	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013475	N2-Acetylornithine	Acetic acid	N-acetyl-L-citrulline deacetylase	Deacetylation	RHEA	34755880
MMDBr0013489	adenosylcob(III)inamide-GDP	coenzyme B12	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0013493	Cytidine	Uridine	Cytidine deaminase	Deamination	RHEA	34755880
MMDBr0013547	Uridine triphosphate	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0013584	Hydrogen cyanide	Thiocyanate	Thiosulfate sulfurtransferase GlpE	Sulfuration	RHEA	34755880
MMDBr0013605	Ciliatine	L-Alanine	2-aminoethylphosphonate--pyruvate transaminase	Hydrolysis of bond	RHEA	34755880
MMDBr0013611	D-Glyceraldehyde 3-phosphate	beta-D-Fructose 6-phosphate	Transaldolase	Transfer of aldol group	RHEA	34755880
MMDBr0013627	Inosinic acid	GMP	GMP reductase	Reduction	RHEA	34755880
MMDBr0013637	(2S)-4-acetamido-2-aminobutanoic acid	Ectoine	L-ectoine synthase	Synthesis	RHEA	34755880
MMDBr0013664	ADP-D-glycero-beta-D-manno-heptose	ADP-L-glycero-beta-D-manno-heptose	ADP-L-glycero-D-manno-heptose-6-epimerase	Epimerization	RHEA	34755880
MMDBr0013674	Succinic acid	Succinyl-CoA	Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial	Ligation	RHEA	34755880
MMDBr0013681	Shikimate	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013683	S-Ribosyl-L-homocysteine	(4S)-4,5-Dihydroxypentan-2,3-dione	S-ribosylhomocysteine lyase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0013686	S-Adenosylhomocysteine	Adenine	Aminodeoxyfutalosine nucleosidase	Hydrolysis of a nucleotide	RHEA	34755880
MMDBr0013703	Dihydroxyacetone phosphate	BPG	Methylglyoxal synthase	Synthesis	RHEA	34755880
MMDBr0013708	Inosinic acid	Phosphoribosyl pyrophosphate	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of phosphoribosyl group; Synthesis	RHEA	34755880
MMDBr0013709	Phosphoribosyl pyrophosphate	Inosinic acid	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013745	Coproporphyrinogen III	Protoporphyrinogen IX	Oxygen-dependent coproporphyrinogen-III oxidase	Oxidation	RHEA	34755880
MMDBr0013768	4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol	2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	Phosphorylation	RHEA	34755880
MMDBr0013770	Inosinic acid	Phosphoribosyl formamidocarboxamide	Bifunctional purine biosynthesis protein PurH	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0013771	D-Ribulose 5-phosphate	L-3,4-Dihydroxybutan-2-one 4-phosphate	3,4-dihydroxy-2-butanone 4-phosphate synthase	Synthesis	RHEA	34755880
MMDBr0013790	Oxalacetic acid	Phosphoenolpyruvic acid	Phosphoenolpyruvate carboxykinase (ATP)	Phosphorylation	RHEA	34755880
MMDBr0013801	Phosphoenolpyruvic acid	UDP-N-Acetyl-3-(1-carboxyvinyl)-D-glucosamine	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	Synthesis	RHEA	34755880
MMDBr0013809	Ribose-1-phosphate	D-Ribose-5-phosphate	Phosphopentomutase	Transfers of a phosphate group; Isomerization; Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013820	Phosphonoacetaldehyde	Acetaldehyde	Phosphonoacetaldehyde hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0013886	Carbamoylphosphate	Citrulline	Ornithine carbamoyltransferase	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013901	L-Arginine	Citrulline	Arginine deiminase	Hydrolysis of l-arginine to citrulline and ammonium ion	RHEA	34755880
MMDBr0013906	Mannitol 1-phosphate	beta-D-Fructose 6-phosphate	Mannitol-1-phosphate 5-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013908	Guanosine triphosphate	Guanosine diphosphate	GTPase ArgK	Dephosphorylation; Hydrolysis; Nucleic acid synthesis and/or repair	RHEA	34755880
MMDBr0013921	(R)-4'-phosphopantetheine	3'-dephospho-CoA	Phosphopantetheine adenylyltransferase	Dephosphorylation	RHEA	34755880
MMDBr0014061	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Chorismate	Chorismate synthase	Synthesis	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0014083	Shikimate 3-phosphate	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Pentafunctional AROM polypeptide	Synthesis; Dehydration and isomerisation; Oxidation; Phosphorylation; Transfer of a carboxyvinyl group	RHEA	34755880
MMDBr0014111	alpha-Ketoisovaleric acid	2-Isopropylmalic acid	Isopropyl malate synthase AMT7	Synthesis	RHEA	34755880
MMDBr0014126	Glycerol	Glycerol 3-phosphate	Glycerol kinase	Phosphorylation	RHEA	34755880
MMDBr0014141	(S)-3-Hydroxybutanoyl-CoA	(3R)-3-hydroxybutanoyl-CoA	Fatty acid oxidation complex subunit alpha	Aerobic and anaerobic degradation of long-chain fatty acids	RHEA	34755880
MMDBr0014167	(R)-2,3-Dihydroxy-isovalerate	(2S)-2-acetolactic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0014180	(6S)-10-formyltetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Bifunctional purine biosynthesis protein PurH	Synthesis	RHEA	34755880
MMDBr0014217	Formiminoglutamic acid	Formamide	Formimidoylglutamase	Hydrolysis of carbon-nitrogen bond	RHEA	34755880
MMDBr0014225	N-succinyl-(2S,6S)-2,6-diaminoheptanedioic acid	LL-2,6-Diaminoheptanedioate	Succinyl-diaminopimelate desuccinylase	Hydrolysis of carbon-nitrogen bond	RHEA	34755880
MMDBr0014282	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	5-Aminoimidazole ribonucleotide	Bifunctional purine biosynthetic protein ADE5,7	Ligation	RHEA	34755880
MMDBr0014333	alpha-D-Glucosamine 1-phosphate	D-glucosamine 6-phosphate	Phosphoglucosamine mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0014337	3-deoxy-D-manno-2-octulosonate	CMP-3-deoxy-beta-D-manno-octulosonate	3-deoxy-manno-octulosonate cytidylyltransferase	Transfer of a cytidylyl group	RHEA	34755880
MMDBr0014353	adenosylcob(III)inamide-GDP	adenosylcob(III)alamin 5'-phosphate	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0014365	4-Imidazolone-5-propionic acid	Formiminoglutamic acid	Imidazolonepropionase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014377	alpha-Ketoglutarate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Histidinol-phosphate aminotransferase	Amine group addition	RHEA	34755880
MMDBr0014392	2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol	2-C-Methyl-D-erythritol-2,4-cyclodiphosphate	Bifunctional enzyme IspD/IspF	Synthesis	RHEA	34755880
MMDBr0014407	Argininosuccinic acid	fumarate	Bifunctional protein ArgHA	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014449	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014450	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014486	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014487	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014489	formate	N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide	Formate-dependent phosphoribosylglycinamide formyltransferase	Transfer of a formyl group	RHEA	34755880
MMDBr0014490	formate	N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide	Formate-dependent phosphoribosylglycinamide formyltransferase	Transfer of a formyl group	RHEA	34755880
MMDBr0017917	5-Aminoimidazole ribonucleotide	4-Amino-2-methyl-5-phosphomethylpyrimidine	Phosphomethylpyrimidine synthase	Synthesis	RHEA	34755880
MMDBr0014523	UDP-2,3-Bis(3-hydroxytetradecanoyl)glucosamine	2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphate	UDP-2,3-diacylglucosamine hydrolase	Dephosphorylation; Hydrolysis of bond	RHEA	34755880
MMDBr0014556	GMP	Phosphoribosyl pyrophosphate	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0014557	Phosphoribosyl pyrophosphate	GMP	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0014566	alpha-Ketoglutarate	5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylic acid	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase	Synthesis	RHEA	34755880
MMDBr0014596	Dihydroxyacetone phosphate	Quinolinic acid	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0014597	Dihydroxyacetone phosphate	Quinolinic acid	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0017926	L-Glutamine	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0014686	D-glycero-beta-D-manno-heptose 7-phosphate	D-glycero-beta-D-manno-heptose 1,7-bisphosphate	D-beta-D-heptose 7-phosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0014718	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014719	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014732	4-Hydroxybenzoic acid	3-Octaprenyl-4-hydroxybenzoate	4-hydroxybenzoate octaprenyltransferase	Synthesis; Reverse C-prenylation of phenalenone	RHEA	34755880
MMDBr0014763	7-Deaza-7-carboxyguanine	7-Cyano-7-carbaguanine	7-cyano-7-deazaguanine synthase	Synthesis	RHEA	34755880
MMDBr0014783	di-trans,octa-cis-undecaprenyl diphosphate	di-trans,octa-cis-undecaprenyl phosphate	Undecaprenyl-diphosphatase BcrC	Dephosphorylation	RHEA	34755880
MMDBr0014813	Inosine triphosphate	IDP	Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014825	di-trans,octa-cis-undecaprenyl phosphate	di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine	Phospho-N-acetylmuramoyl-pentapeptide-transferase	Transfer of phospho-N-acetylmuramoyl-pentapeptide	RHEA	34755880
MMDBr0014829	Xanthosine 5-triphosphate	XDP	Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014918	Potassium	Potassium	K(+)/H(+) antiporter NhaP2	Transport	RHEA	34755880
MMDBr0014919	Potassium	Potassium	K(+)/H(+) antiporter NhaP2	Transport	RHEA	34755880
MMDBr0014941	5'-Deoxyadenosine	5'-Deoxyribose	Aminodeoxyfutalosine nucleosidase	Hydrolysis of a nucleotide	RHEA	34755880
MMDBr0014942	5'-Deoxyadenosine	5'-Deoxyribose	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	Hydrolysis of a nucleotide	RHEA	34755880
MMDBr0015026	di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine	di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3	RHEA	34755880
MMDBr0015136	3-Isopropylmalate	2-Isopropylmalic acid	3-isopropylmalate dehydratase large subunit gloJ	Isomerization	RHEA	34755880
MMDBr0015316	L-Aspartate-semialdehyde	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate synthase	Synthesis	RHEA	34755880
MMDBr0015402	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015405	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015480	Phosphoribosyl pyrophosphate	nicotinate beta-D-ribonucleotide	Probable nicotinate phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0016462	(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate	Cyclic pyranopterin monophosphate	Cyclic pyranopterin monophosphate synthase	Synthesis	RHEA	34755880
MMDBr0017981	Prephenate	3-phenylpyruvic acid	Carboxy-S-adenosyl-L-methionine synthase	Synthesis	RHEA	34755880
MMDBr0017322	N(4)-acetylcytidine	Acetic acid	N(4)-acetylcytidine amidohydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0017323	N(4)-acetyl-2'-deoxycytidine	Deoxycytidine	N(4)-acetylcytidine amidohydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0017324	N(4)-acetylcytosine	Acetic acid	N(4)-acetylcytidine amidohydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0017681	dZDP	2-amino-2'-deoxyadenosine 5'-triphosphate(4−)	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0017834	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	D-Glyceraldehyde 3-phosphate	Tryptophan synthase	Synthesis	RHEA	34755880
MMDBr0017843	L-Glutamine	GMP	GMP synthase [glutamine-hydrolyzing]	Synthesis	RHEA	34755880
MMDBr0017850	L-Threonine	L-2-Amino-3-oxobutanoic acid	L-threonine 3-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0017874	L-Glutamine	L-Glutamic acid	Thermolabile glutaminase	Synthesis	RHEA	34755880
MMDBr0017886	L-Tryptophan	Indole	Probable tryptophanase	Non-hydrolytic bond cleavage	RHEA	34755880
MMDBr0017897	L-Methionine	S-Adenosylmethionine	S-adenosylmethionine synthase	Synthesis	RHEA	34755880
MMDBr0017916	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	AICAR	Imidazole glycerol phosphate synthase subunit HisH	Synthesis	RHEA	34755880
MMDBr0024368	L-Isoleucine	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024392	L-Cystine	L-Cysteine	Phosphoadenosine 5'-phosphosulfate reductase	Reduction	RHEA	34755880
MMDBr0024401	L-Serine	Adenosine 3',5'-diphosphate	Holo-[acyl-carrier-protein] synthase	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0024411	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024415	(S)-4-Amino-5-oxopentanoate	Hydrogen Ion	Glutamyl-tRNA reductase	Reduction	RHEA	34755880
MMDBr0024424	S-Adenosylmethionine	S-Adenosylhomocysteine	Protein-L-isoaspartate O-methyltransferase	Methylation	RHEA	34755880
MMDBr0024435	Deoxyribose 5-phosphate	Acetaldehyde	Deoxyribose-phosphate aldolase	Aldol addition (or reverse)	RHEA	34755880
MMDBr0024471	L-Methionine	L-Cysteine	Peptide methionine sulfoxide reductase MsrA	Reduction	RHEA	34755880
MMDBr0024474	L-Proline	diphosphate	Proline--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024477	Cytidine triphosphate	diphosphate	CCA-adding enzyme	Synthesis and repair of 3'-terminal CCA sequence of tRNA	RHEA	34755880
MMDBr0024500	Glycerol 3-phosphate	CoA	Glycerol-3-phosphate acyltransferase	Acylation	RHEA	34755880
MMDBr0024522	Glycine	diphosphate	Glycine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024530	L-Serine	diphosphate	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0024533	L-Glutamine	Ammonium	Probable chemoreceptor glutamine deamidase CheD	Deamidation	RHEA	34755880
MMDBr0024535	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA large subunit methyltransferase F	Methylation	RHEA	34755880
MMDBr0024539	Tetra-mu3-sulfido-tetrairon(2+)	5'-Deoxyadenosine	Lipoyl synthase	Synthesis	RHEA	34755880
MMDBr0024559	Adenosine triphosphate	Hydrogen Ion	Histidine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024578	Adenosine triphosphate	diphosphate	Cysteine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024581	Water	Hydrogen Ion	Cobalamin import ATP-binding protein BtuD	Transport	RHEA	34755880
MMDBr0024590	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0024593	ADP-alpha-D-glucose	Hydrogen Ion	Probable glycogen synthase	Synthesis	RHEA	34755880
MMDBr0024612	Glycerol 3-phosphate	Dihydroxyacetone phosphate	Probable anaerobic glycerol-3-phosphate dehydrogenase subunit B	Dehydrogenation	RHEA	34755880
MMDBr0024628	L-Phenylalanine	Hydrogen Ion	Phenylalanine--tRNA ligase beta subunit	Ligation	RHEA	34755880
MMDBr0024629	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC	Synthesis	RHEA	34755880
MMDBr0024632	L-Aspartic acid	diphosphate	Aspartate--tRNA(Asp) ligase	Ligation	RHEA	34755880
MMDBr0024644	L-Cystine	L-Cysteine	Peptide methionine sulfoxide reductase MsrA	Reduction	RHEA	34755880
MMDBr0024649	L-Glutamine	diphosphate	Glutamine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024716	NAD	Hydrogen Ion	Fatty acid oxidation complex subunit alpha	Dehydrogenation	RHEA	34755880
MMDBr0024755	Adenosine triphosphate	Hydrogen Ion	N-acetylmannosamine kinase	Phosphorylation	RHEA	34755880
MMDBr0024765	7-Aminomethyl-7-carbaguanine	Guanine	Putative queuine tRNA-ribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0024768	L-Methionine	L-Cysteine	Peptide methionine sulfoxide reductase MsrB	Reduction	RHEA	34755880
MMDBr0024774	Glycine	Carbon dioxide	Probable glycine dehydrogenase (decarboxylating) subunit 1	Dehydrogenation	RHEA	34755880
MMDBr0024778	(6S)-10-formyltetrahydrofolic acid	(6S)-5,6,7,8-tetrahydrofolic acid	Methionyl-tRNA formyltransferase	Transfer of a formyl group	RHEA	34755880
MMDBr0024787	L-Threonine	Hydrogen Ion	Threonine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024808	1-Deoxy-D-xylulose 5-phosphate	2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate	Thiazole synthase	Synthesis	RHEA	34755880
MMDBr0024813	Dimethylallylpyrophosphate	diphosphate	tRNA dimethylallyltransferase	Transfer of a dimethylallyl group	RHEA	34755880
MMDBr0024825	Hydrogen Ion	ADP-D-glycero-beta-D-manno-heptose	Bifunctional protein HldE	Phosphorylation	RHEA	34755880
MMDBr0024826	2-deoxy-alpha-D-ribose 1-phosphate	Deoxyribose 5-phosphate	Phosphopentomutase	Transfers of a phosphate group; Isomerization; Intramolecular transfer of functional group	RHEA	34755880
MMDBr0024831	Deoxyadenosine	Deoxyinosine	Adenosine deaminase	Hydrolytic deamination	RHEA	34755880
MMDBr0024832	Deoxyadenosine	Deoxyinosine	Adenosine deaminase	Hydrolytic deamination	RHEA	34755880
MMDBr0024834	S-Adenosylmethionine	S-Adenosylhomocysteine	Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE	Methylation	RHEA	34755880
MMDBr0024851	L-Dihydroorotic acid	orotate	Dihydroorotate dehydrogenase (quinone)	Dehydrogenation	RHEA	34755880
MMDBr0024875	S-Adenosylmethionine	S-Adenosylhomocysteine	Ubiquinone biosynthesis O-methyltransferase	Methylation	RHEA	34755880
MMDBr0024883	S-Adenosylmethionine	Adenine	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	Isomerization	RHEA	34755880
MMDBr0024925	Glycerol 3-phosphate	Phosphate	Glycerol-3-phosphate acyltransferase	Acylation	RHEA	34755880
MMDBr0024967	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine(37)-N1)-methyltransferase Trm5b	Methylation	RHEA	34755880
MMDBr0024971	L-Threonylcarbamoyladenylate	Hydrogen Ion	tRNA N6-adenosine threonylcarbamoyltransferase	Synthesis	RHEA	34755880
MMDBr0025060	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0025063	S-Adenosylmethionine	S-Adenosylhomocysteine	23S rRNA (uracil(747)-C(5))-methyltransferase	Methylation	RHEA	34755880
MMDBr0025066	S-Adenosylmethionine	S-Adenosylhomocysteine	Demethylmenaquinone methyltransferase	Methylation	RHEA	34755880
MMDBr0025071	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine-N(7)-)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025072	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (uracil(54)-C(5))-methyltransferase	Methylation	RHEA	34755880
MMDBr0025075	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA large subunit methyltransferase E	Methylation	RHEA	34755880
MMDBr0025078	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA small subunit methyltransferase G	Methylation	RHEA	34755880
MMDBr0025085	S-Adenosylmethionine	S-Adenosylhomocysteine	Putative ribosomal RNA large subunit methyltransferase H	Methylation	RHEA	34755880
MMDBr0025086	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA small subunit methyltransferase F	Methylation	RHEA	34755880
MMDBr0025100	S-Adenosylmethionine	S-Adenosylhomocysteine	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	Methylation	RHEA	34755880
MMDBr0025102	di-mu-Sulfido-diiron(1+)	5'-Deoxyadenosine	Ribosomal RNA large subunit methyltransferase N	Methylation	RHEA	34755880
MMDBr0025105	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA small subunit methyltransferase H	Methylation	RHEA	34755880
MMDBr0025129	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA1(Val) (adenine(37)-N6)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025144	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA small subunit methyltransferase J	Methylation	RHEA	34755880
MMDBr0025145	di-mu-Sulfido-diiron(1+)	5'-Deoxyadenosine	Probable dual-specificity RNA methyltransferase RlmN	Methylation	RHEA	34755880
MMDBr0025152	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA/tmRNA (uracil-C(5))-methyltransferase	Methylation	RHEA	34755880
MMDBr0025167	L-Lysine	Hydrogen Ion	tRNA(Ile)-lysidine synthase	Synthesis	RHEA	34755880
MMDBr0025190	S-Adenosylmethionine	S-Adenosylhomocysteine	Ubiquinone biosynthesis O-methyltransferase	Methylation	RHEA	34755880
MMDBr0025193	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0025205	L-Lactic acid	Pyruvic acid	L-lactate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0025215	ADP	Hydrogen Ion	Putative phosphoenolpyruvate synthase regulatory protein	Synthesis	RHEA	34755880
MMDBr0025280	Hydrogen Ion	Sodium	Na(+)-translocating NADH-quinone reductase subunit D	Reduction	RHEA	34755880
MMDBr0025300	Hydrogen Ion	diphosphate	Putative phosphoenolpyruvate synthase regulatory protein	Synthesis	RHEA	34755880
MMDBr0025320	(R)-Lipoic acid	Hydrogen Ion	Lipoate-protein ligase A subunit 1	Ligation	RHEA	34755880
MMDBr0025326	Guanosine triphosphate	5'-Deoxyadenosine	Probable GTP 3',8-cyclase	Cycle formation	RHEA	34755880
MMDBr0025432	carboxy-S-adenosyl-L-methionine	S-Adenosylhomocysteine	tRNA U34 carboxymethyltransferase	Methylation	RHEA	34755880
MMDBr0025490	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal protein L11 methyltransferase	Methylation	RHEA	34755880
MMDBr0025514	Acetyl-CoA	Malonyl-CoA	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	Carboxylation	RHEA	34755880
MMDBr0025620	L-Cysteine	Sn-Glycerol-1-phosphate	Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase	Transfer of the diacylglyceryl group	RHEA	34755880
MMDBr0025638	Adenosine triphosphate	L-Cysteine	tRNA-cytidine(32) 2-sulfurtransferase	Sulfuration	RHEA	34755880
MMDBr0025639	Adenosine triphosphate	L-Cysteine	tRNA-cytidine(32) 2-sulfurtransferase	Sulfuration	RHEA	34755880
MMDBr0026022	Adenosine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026023	Cytidine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026024	Uridine 5'-monophosphate	Uridine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026025	Guanosine monophosphate	Guanosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026046	Uridine 5'-diphosphate	Uridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026047	Uridine 5'-diphosphate	Cytidine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026048	Guanosine 3',5'-bis(diphosphate)	Guanosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026085	Deoxyuridine-5'-diphosphate	Deoxyuridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026086	2'-Deoxycytidine 5'-diphosphate	Deoxycytidine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026087	2'-Deoxyadenosine 5'-diphosphate	Deoxyadenosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026088	2'-Deoxyguanosine 5'-diphosphate	2'-Deoxyguanosine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880

Genome Data

Genome Link

Not Available

Genome Length

Not Available

# Predicted Proteins

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

Reference

PMID: 17704766

Source Links

GenBank