Reaction Identification
Reaction IDMMDBr0006960
Reaction typeNot Available
Sub-SystemCitric acid cycle
In non-microbes0
In microbes219
Data SourcesVMH
Metabolism
PrecursorReactionProduct

Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0000004Acidaminococcus intestiniEubacteriaFirmicutesAnaerobe
MMDBm0808970Acidaminococcus intestiniEubacteriaFirmicutesAnaerobe
MMDBm0000009Adlercreutzia equolifaciensEubacteriaActinobacteriaAnaerobe
MMDBm0801616Anaerofustis stercorihominisEubacteriaFirmicutesAnaerobe
MMDBm0802249Anaerostipes caccaeEubacteriaFirmicutesAnaerobe
MMDBm0000021Anaerostipes caccaeEubacteriaFirmicutesAnaerobe
MMDBm0766846Aneurinibacillus aneurinilyticusEubacteriaFirmicutesAerobe
MMDBm0676734Arthrobacter castelliEubacteriaActinobacteriaAerobe
MMDBm0000025Bacillus amyloliquefaciensEubacteriaFirmicutesAerobe
MMDBm0001264Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0761185Cytobacillus firmusEubacteriaFirmicutesFacultative anaerobe
MMDBm0730452Bacillus flexusEubacteriaFirmicutesAerobe
MMDBm0730482Bacillus infantisEubacteriaFirmicutesAerobe
MMDBm0730692Bacillus mojavensisEubacteriaFirmicutesAerobe
MMDBm0392086Bacteroides cellulosilyticusEubacteriaBacteroidetesAnaerobe
MMDBm0395105Phocaeicola coprocolaEubacteriaBacteroidetesAnaerobe
MMDBm0395106Phocaeicola coprophilusEubacteriaBacteroidetesAnaerobe
MMDBm0395112Phocaeicola doreiEubacteriaBacteroidetesAnaerobe
MMDBm0392093Bacteroides eggerthiiEubacteriaBacteroidetesAnaerobe
MMDBm0392094Bacteroides eggerthiiEubacteriaBacteroidetesAnaerobe
MMDBm0392100Bacteroides finegoldiiEubacteriaBacteroidetesAnaerobe
MMDBm0000044Bacteroides fragilisEubacteriaBacteroidetesAnaerobe
MMDBm0392196Bacteroides intestinalisEubacteriaBacteroidetesAnaerobe
MMDBm0395113Phocaeicola massiliensisEubacteriaBacteroidetesAnaerobe
MMDBm0392206Bacteroides oleiciplenusEubacteriaBacteroidetesAnaerobe
MMDBm0392208Bacteroides ovatusEubacteriaBacteroidetesAnaerobe
MMDBm0392248Bacteroides xylanisolvensEubacteriaBacteroidetesAnaerobe
MMDBm0392211Bacteroides ovatusEubacteriaBacteroidetesAnaerobe
MMDBm0395117Phocaeicola plebeiusEubacteriaBacteroidetesAnaerobe
MMDBm0392215Bacteroides pyogenesEubacteriaBacteroidetesObligate anaerobe
MMDBm0392224Bacteroides salyersiaeEubacteriaBacteroidetesAnaerobe
MMDBm0392261Bacteroides sp. 1_1_14EubacteriaBacteroidetesAnaerobe
MMDBm0392262Bacteroides sp. 1_1_30EubacteriaBacteroidetesAnaerobe
MMDBm0000054Bacteroides thetaiotaomicronEubacteriaBacteroidetesAnaerobe
MMDBm0392276Bacteroides sp. 2_1_22EubacteriaBacteroidetesAnaerobe
MMDBm0000975Bacteroides sp. 2_1_33BEubacteriaBacteroidetesAnaerobe
MMDBm0394980Parabacteroides sp. 2_1_7EubacteriaBacteroidetesAnaerobe
MMDBm0392277Bacteroides sp. 2_2_4EubacteriaBacteroidetesAnaerobe
MMDBm0394979Parabacteroides sp. 20_3EubacteriaBacteroidetesAnaerobe
MMDBm0392289Bacteroides sp. 3_1_19EubacteriaBacteroidetesAnaerobe
MMDBm0392290Bacteroides sp. 3_1_23EubacteriaBacteroidetesAnaerobe
MMDBm0392291Bacteroides sp. 3_1_33FAAEubacteriaBacteroidetesAnaerobe
MMDBm0392292Bacteroides sp. 3_1_40AEubacteriaBacteroidetesAnaerobe
MMDBm0392293Bacteroides sp. 3_2_5EubacteriaBacteroidetesAnaerobe
MMDBm0392300Bacteroides sp. 4_1_36EubacteriaBacteroidetesAnaerobe
MMDBm0392301Bacteroides sp. 4_3_47FAAEubacteriaBacteroidetesAnaerobe
MMDBm0392307Bacteroides sp. 9_1_42FAAEubacteriaBacteroidetesAnaerobe
MMDBm0392454Bacteroides sp. D1EubacteriaBacteroidetesAnaerobe
MMDBm0392455Bacteroides sp. D2EubacteriaBacteroidetesAnaerobe
MMDBm0392456Bacteroides sp. D20EubacteriaBacteroidetesAnaerobe
MMDBm0392457Bacteroides sp. D22EubacteriaBacteroidetesAnaerobe
MMDBm0000053Bacteroides stercorisEubacteriaBacteroidetesAnaerobe
MMDBm0392237Bacteroides timonensisEubacteriaBacteroidetesAnaerobe
MMDBm0392239Bacteroides uniformisEubacteriaBacteroidetesAnaerobe
MMDBm0514239Campylobacter ureolyticusEubacteriaProteobacteriaAerobe
MMDBm0000057Bacteroides vulgatusEubacteriaBacteroidetesAnaerobe
MMDBm0392247Bacteroides xylanisolvensEubacteriaBacteroidetesAnaerobe
MMDBm0000058Bacteroides xylanisolvensEubacteriaBacteroidetesAnaerobe
MMDBm0509991Bilophila wadsworthiaEubacteriaProteobacteriaAnaerobe
MMDBm0802298Blautia hydrogenotrophicaEubacteriaFirmicutesAnaerobe
MMDBm0641709Brachyspira pilosicoliEubacteriaSpirochaetesAnaerobe
MMDBm0393350Butyricimonas synergisticaEubacteriaBacteroidetesAnaerobe
MMDBm0393353Butyricimonas virosaEubacteriaBacteroidetesAnaerobe
MMDBm0513907Campylobacter coliEubacteriaProteobacteriaMicroaerophile
MMDBm0001371Campylobacter concisusEubacteriaProteobacteriaMicroaerophilic
MMDBm0001370Campylobacter curvusEubacteriaProteobacteriaMicroaerophilic
MMDBm0000101Campylobacter hominisEubacteriaProteobacteriaAnaerobe
MMDBm0513988Campylobacter hyointestinalisEubacteriaProteobacteriaMicroaerophile
MMDBm0001368Campylobacter jejuniEubacteriaProteobacteriaMicroaerophilic
MMDBm0514117Campylobacter jejuniEubacteriaProteobacteriaMicroaerophile
MMDBm0002282Campylobacter jejuniEubacteriaProteobacteriaMicroaerophile
MMDBm0001367Campylobacter jejuniEubacteriaProteobacteriaMicroaerophilic
MMDBm0514218Campylobacter showaeEubacteriaProteobacteriaAerobe
MMDBm0514234Campylobacter upsaliensisEubacteriaProteobacteriaMicroaerophile
MMDBm0881918Candidatus Nitrososphaera gargensisNot AvailableThaumarchaeotaAerobe
MMDBm0000882Cetobacterium someraeEubacteriaFusobacteriaAnaerobe
MMDBm0000107Cloacibacillus evryensisEubacteriaSynergistetesAnaerobe
MMDBm0001146Clostridiales bacterium 1_7_47FAAEubacteriaFirmicutesObligate anaerobe
MMDBm0805001Intestinibacter bartlettiiEubacteriaFirmicutesObligate anaerobe
MMDBm0805019Paraclostridium bifermentansEubacteriaFirmicutesObligate anaerobe
MMDBm0798783Clostridium butyricumEubacteriaFirmicutesAnaerobe
MMDBm0001470Clostridium difficileEubacteriaFirmicutesAnaerobe
MMDBm0804868Clostridioides difficileEubacteriaFirmicutesObligate anaerobe
MMDBm0804869Clostridioides difficileEubacteriaFirmicutesObligate anaerobe
MMDBm0000112Clostridioides difficileEubacteriaFirmicutesAnaerobe
MMDBm0805202Terrisporobacter glycolicusEubacteriaFirmicutesObligate anaerobe
MMDBm0000793Peptacetobacter hiranonisEubacteriaFirmicutesAnaerobe
MMDBm0806090Clostridium leptumEubacteriaFirmicutesAnaerobe
MMDBm0798898Clostridium paraputrificumEubacteriaFirmicutesAnaerobe
MMDBm0805008Paeniclostridium sordelliiEubacteriaFirmicutesObligate anaerobe
MMDBm0800387Clostridium sp. SS2/1EubacteriaFirmicutesAnaerobe
MMDBm0001476Clostridium sp. SY8519EubacteriaFirmicutesAnaerobe
MMDBm0798946Clostridium sporogenesEubacteriaFirmicutesAnaerobe
MMDBm0806093Clostridium sporosphaeroidesEubacteriaFirmicutesFacultative anaerobe
MMDBm0802901Clostridium symbiosumEubacteriaFirmicutesAnaerobe
MMDBm0798974Clostridium tyrobutyricumEubacteriaFirmicutesAnaerobe
MMDBm0510057Desulfovibrio desulfuricansEubacteriaProteobacteriaFacultative anaerobe
MMDBm0510096Desulfovibrio pigerEubacteriaProteobacteriaAnaerobe
MMDBm0510126Desulfovibrio sp. 3_1_syn3EubacteriaProteobacteriaAnaerobe
MMDBm0000150Eggerthella lentaEubacteriaActinobacteriaAnaerobe
MMDBm0724384Eggerthella sp. 1_3_56FAAEubacteriaActinobacteriaNanaerobe
MMDBm0000151Eggerthella sp. YY7918EubacteriaActinobacteriaNanaerobe
MMDBm0002278Enterococcus faecalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0787115Enterococcus faecalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0787127Enterococcus faecalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0787132Enterococcus faecalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0001575Enterococcus faecalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0787486Enterococcus faeciumEubacteriaFirmicutesFacultative anaerobe
MMDBm0000153Enterococcus faecalisEubacteriaFirmicutesFacultative anaerobe
MMDBm0806711Eubacterium brachyEubacteriaFirmicutesAnaerobe
MMDBm0802216Anaerobutyricum halliiEubacteriaFirmicutesObligate anaerobe
MMDBm0801634Eubacterium ramulusEubacteriaFirmicutesAnaerobe
MMDBm0806720Eubacterium sulciEubacteriaFirmicutesAnaerobe
MMDBm0000180Faecalibacterium prausnitziiEubacteriaFirmicutesAnaerobe
MMDBm0416185Fusobacterium gonidiaformansEubacteriaFusobacteriaAnaerobe
MMDBm0416186Fusobacterium gonidiaformansEubacteriaFusobacteriaAnaerobe
MMDBm0416200Fusobacterium necrophorumEubacteriaFusobacteriaAnaerobe
MMDBm0416223Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416225Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416228Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416237Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416238Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416239Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416251Fusobacterium periodonticumEubacteriaFusobacteriaAnaerobe
MMDBm0416252Fusobacterium periodonticumEubacteriaFusobacteriaAnaerobe
MMDBm0416256Fusobacterium russiiEubacteriaFusobacteriaMicroaerophile
MMDBm0416224Fusobacterium nucleatumEubacteriaFusobacteriaAnaerobe
MMDBm0416261Fusobacterium variumEubacteriaFusobacteriaAnaerobe
MMDBm0001132Gordonibacter pamelaeaeEubacteriaActinobacteriaAnaerobe
MMDBm0515049Helicobacter canadensisEubacteriaProteobacteriaMicroaerophile
MMDBm0515057Helicobacter cinaediEubacteriaProteobacteriaMicroaerophile
MMDBm0515086Helicobacter pullorumEubacteriaProteobacteriaMicroaerophile
MMDBm0515554Helicobacter winghamensisEubacteriaProteobacteriaMicroaerophile
MMDBm0001156Lachnospiraceae bacterium 5_1_63FAAEubacteriaFirmicutesAnaerobe
MMDBm0792733Lactobacillus antriEubacteriaFirmicutesFacultative anaerobe
MMDBm0001741Lactobacillus caseiEubacteriaFirmicutesFacultative anaerobe
MMDBm0001748Lactobacillus caseiEubacteriaFirmicutesFacultative anaerobe
MMDBm0790274Lacticaseibacillus paracaseiEubacteriaFirmicutesFacultative anaerobe
MMDBm0790275Lacticaseibacillus paracaseiEubacteriaFirmicutesFacultative anaerobe
MMDBm0001751Lactiplantibacillus plantarumEubacteriaFirmicutesMicroaerophilic
MMDBm0790394Lactiplantibacillus plantarumEubacteriaFirmicutesFacultative anaerobe
MMDBm0001734Lactiplantibacillus plantarumEubacteriaFirmicutesFacultative anaerobe
MMDBm0001752Lactobacillus rhamnosusEubacteriaFirmicutesFacultative anaerobe
MMDBm0790338Lacticaseibacillus rhamnosusEubacteriaFirmicutesFacultative anaerobe
MMDBm0792713Ligilactobacillus ruminisEubacteriaFirmicutesFacultative anaerobe
MMDBm0792726Ligilactobacillus salivariusEubacteriaFirmicutesFacultative anaerobe
MMDBm0001736Ligilactobacillus salivariusEubacteriaFirmicutesFacultative anaerobe
MMDBm0766514Listeria grayiEubacteriaFirmicutesFacultative anaerobe
MMDBm0766676Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0001784Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0766572Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0766585Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0766588Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0766709Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0766729Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0766731Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0766734Listeria monocytogenesEubacteriaFirmicutesFacultative anaerobe
MMDBm0000216Megamonas hypermegaleEubacteriaFirmicutesAnaerobe
MMDBm0001817Methanobrevibacter ruminantiumNot AvailableEuryarchaeotaAnaerobe
MMDBm0000218Methanobrevibacter smithiiNot AvailableEuryarchaeotaAnaerobe
MMDBm0881917Methanomassiliicoccus luminyensisNot AvailableEuryarchaeotaAnaerobe
MMDBm0001846Methanosphaera stadtmanaeNot AvailableEuryarchaeotaAnaerobe
MMDBm0809112Mitsuokella multacidaEubacteriaFirmicutesAnaerobe
MMDBm0564358Nevskia ramosaEubacteriaProteobacteriaAnaerobe
MMDBm0000223Odoribacter splanchnicusEubacteriaBacteroidetesAnaerobe
MMDBm0500745Oxalobacter formigenesEubacteriaProteobacteriaAnaerobe
MMDBm0500746Oxalobacter formigenesEubacteriaProteobacteriaAnaerobe
MMDBm0000232Parabacteroides distasonisEubacteriaBacteroidetesAnaerobe
MMDBm0000233Parabacteroides goldsteiniiEubacteriaBacteroidetesAnaerobe
MMDBm0394966Parabacteroides gordoniiEubacteriaBacteroidetes
MMDBm0394968Parabacteroides johnsoniiEubacteriaBacteroidetesAnaerobe
MMDBm0394970Parabacteroides merdaeEubacteriaBacteroidetesAnaerobe
MMDBm0395005Parabacteroides sp. D13EubacteriaBacteroidetesAnaerobe
MMDBm0809016Phascolarctobacterium succinatutensEubacteriaFirmicutesAnaerobe
MMDBm0002369Porphyromonas gingivalisEubacteriaBacteroidetesAnaerobe
MMDBm0393499Porphyromonas someraeEubacteriaBacteroidetesAnaerobe
MMDBm0393926Prevotella biviaEubacteriaBacteroidetesAnaerobe
MMDBm0000860Prevotella copriEubacteriaBacteroidetesAnaerobe
MMDBm0393945Prevotella corporisEubacteriaBacteroidetesAnaerobe
MMDBm0393952Prevotella denticolaEubacteriaBacteroidetesAnaerobe
MMDBm0393955Prevotella disiensEubacteriaBacteroidetesAnaerobe
MMDBm0000247Prevotella intermediaEubacteriaBacteroidetesAnaerobe
MMDBm0393977Prevotella loescheiiEubacteriaBacteroidetesAnaerobe
MMDBm0393995Prevotella nanceiensisEubacteriaBacteroidetesAnaerobe
MMDBm0394030Prevotella salivaeEubacteriaBacteroidetesAnaerobe
MMDBm0394039Prevotella timonensisEubacteriaBacteroidetesAnaerobe
MMDBm0394042Prevotella veroralisEubacteriaBacteroidetesAnaerobe
MMDBm0805654Pseudoflavonifractor capillosusEubacteriaFirmicutesAnaerobe
MMDBm0580104Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0580255Pseudomonas alcaliphilaEubacteriaProteobacteriaAerobe
MMDBm0580585Pseudomonas monteiliiEubacteriaProteobacteriaAerobe
MMDBm0580586Pseudomonas monteiliiEubacteriaProteobacteriaAerobe
MMDBm0580229Pseudomonas nitroreducensEubacteriaProteobacteriaAerobe
MMDBm0580236Pseudomonas oleovoransEubacteriaProteobacteriaAerobe
MMDBm0658861Rhodococcus rhodochrousEubacteriaActinobacteriaAerobe
MMDBm0397948Rudanella luteaEubacteriaBacteroidetesAerobe
MMDBm0001136Ruminococcaceae bacterium D16EubacteriaFirmicutesObligate anaerobe
MMDBm0805717Ruminococcus gauvreauiiEubacteriaFirmicutesAnaerobe
MMDBm0724473Slackia piriformisEubacteriaActinobacteriaAnaerobe
MMDBm0471855Sphingomonas paucimobilisEubacteriaProteobacteria
MMDBm0000633Staphylococcus capitisEubacteriaFirmicutesFacultative anaerobe
MMDBm0779406Staphylococcus cohniiEubacteriaFirmicutesFacultative anaerobe
MMDBm0779566Staphylococcus pasteuriEubacteriaFirmicutesFacultative anaerobe
MMDBm0806047Subdoligranulum variabileEubacteriaFirmicutesAnaerobe
MMDBm0501242Sutterella wadsworthensisEubacteriaProteobacteriaMicroaerophile/ anaerobe
MMDBm0000287Veillonella parvulaEubacteriaFirmicutesAnaerobe
MMDBm0809759Veillonella seminalisEubacteriaFirmicutesObligate anaerobe
MMDBm0809833Veillonella sp. 3_1_44EubacteriaFirmicutesObligate anaerobe
MMDBm0809834Veillonella sp. 6_1_27EubacteriaFirmicutesObligate anaerobe
MMDBm0793485Weissella paramesenteroidesEubacteriaFirmicutesFacultative anaerobe
MMDBm0000246Prevotella intermediaEubacteriaBacteroidetesAnaerobe
MMDBm0000763Prevotella bryantiiEubacteriaBacteroidetesAnaerobe
MMDBm0000923Bacteroides nordiiEubacteriaBacteroidetesAnaerobe
MMDBm0001035Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0392190Bacteroides graminisolvensEubacteriaBacteroidetesAnaerobe
MMDBm0393911Prevotella albensisEubacteriaBacteroidetesAnaerobe
MMDBm0393941Prevotella conceptionensisEubacteriaBacteroidetesAnaerobe
MMDBm0658814Rhodococcus hoagiiEubacteriaActinobacteria
MMDBm0670509Microbacterium gubbeenenseEubacteriaActinobacteriaFacultative anaerobe