| MMDBm0645903 | Actinomyces naeslundii | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0001232 | Arcanobacterium haemolyticum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0676734 | Arthrobacter castelli | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000024 | Bacillus altitudinis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001274 | amyloliquefaciens | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000025 | Bacillus amyloliquefaciens | Eubacteria | Firmicutes | Aerobe |
| MMDBm0730668 | Bacillus atrophaeus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001257 | Bacillus clausii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001255 | Bacillus licheniformis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0730692 | Bacillus mojavensis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0730563 | Bacillus pumilus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0730698 | Bacillus sonorensis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0730186 | Bacillus thuringiensis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000033 | Bacillus vallismortis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000039 | Bacteroides clarus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0648041 | Bifidobacterium breve | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648074 | Bifidobacterium dentium | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000087 | Bifidobacterium mongoliense | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0648166 | Bifidobacterium scardovii | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0665201 | Brachybacterium paraconglomeratum | Eubacteria | Actinobacteria | Aerobe, microaerophile |
| MMDBm0663577 | Brevibacterium casei | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0663594 | Brevibacterium linens | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000100 | Campylobacter fetus | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0685945 | Cellulosimicrobium cellulans | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0533412 | Citrobacter amalonaticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0533439 | Citrobacter portucalensis | Eubacteria | Proteobacteria | |
| MMDBm0798609 | Clostridium botulinum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0667921 | Curtobacterium flaccumfaciens | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0649955 | Dietzia cinnamea | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0557462 | Edwardsiella tarda | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002181 | Edwardsiella tarda | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0553036 | Enterobacteriaceae bacterium 9_2_54FAA | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000160 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0650438 | Gordonia rubripertincta | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0650453 | Gordonia terrae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0650454 | Gordonia terrae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0557502 | Hafnia alvei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001685 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0503626 | Kingella oralis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0544444 | Klebsiella michiganensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0682673 | Kocuria palustris | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001729 | Kocuria rhizophila | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001732 | Kytococcus sedentarius | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0792733 | Lactobacillus antri | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001740 | brevis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792655 | Lactobacillus brevis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792610 | Lentilactobacillus buchneri | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792735 | Lactobacillus coleohominis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792760 | Limosilactobacillus fermentum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001747 | Limosilactobacillus fermentum | Eubacteria | Firmicutes | Facultative anaerobe; microaerophile |
| MMDBm0792620 | Lentilactobacillus hilgardii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792746 | Lactobacillus mucosae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792769 | Limosilactobacillus oris | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001734 | Lactiplantibacillus plantarum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001761 | Limosilactobacillus reuteri | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0491302 | Lautropia mirabilis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0793164 | Leuconostoc lactis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0793161 | Leuconostoc lactis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0809098 | Megamonas funiformis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000216 | Megamonas hypermegale | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0670563 | Microbacterium oleivorans | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0670570 | Microbacterium paraoxydans | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001872 | Micrococcus luteus | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0809111 | Mitsuokella jalaludinii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0809112 | Mitsuokella multacida | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0657325 | Mycolicibacterium fortuitum | Eubacteria | Actinobacteria | Microaerophile |
| MMDBm0503661 | Neisseria cinerea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0503672 | Neisseria flavescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0503763 | Neisseria macacae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0503982 | Neisseria mucosa | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0503999 | Neisseria subflava | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000226 | Paenibacillus alvei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0555709 | Pantoea agglomerans | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002383 | Propionibacterium acnes | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0692716 | Cutibacterium avidum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0558527 | Providencia alcalifaciens | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0558544 | Providencia rettgeri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0558546 | Providencia rustigianii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0580236 | Pseudomonas oleovorans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0547370 | Raoultella planticola | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0658815 | Rhodococcus hoagii | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002444 | Rhodococcus erythropolis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0658861 | Rhodococcus rhodochrous | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0559624 | Chania multitudinisentens | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0552405 | Trabulsiella guamensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0646445 | Trueperella pyogenes | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0646461 | Varibaculum cambriense | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0809759 | Veillonella seminalis | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0809834 | Veillonella sp. 6_1_27 | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0793461 | Weissella cibaria | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0793464 | Weissella confusa | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562438 | Yersinia frederiksenii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562754 | Yersinia rohdei | Eubacteria | Proteobacteria | Obligate anaerobe |
| MMDBm0000207 | Limosilactobacillus reuteri | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0658814 | Rhodococcus hoagii | Eubacteria | Actinobacteria | |
| MMDBm0692719 | Cutibacterium granulosum | Eubacteria | Actinobacteria | |