Isomerization

Reaction Identification
Reaction IDMMDBr0013941
Reaction typeIsomerization
Sub-SystemNot Available
In non-microbes0
In microbes248
Data SourcesRHEA;
Metabolism
PrecursorReactionProduct
S-Methyl-5-thio-alpha-D-ribose 1-phosphate

5-deoxyribose 1-phosphate isomerase

Isomerization

5-Methylthioribulose 1-phosphate
Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0730133Bacillus thuringiensisEubacteriaFirmicutes
MMDBm0001162Acaryochloris marinaEubacteriaCyanobacteriaAerobe
MMDBm0001457Clostridium thermocellumEubacteriaFirmicutesAnaerobe
MMDBm0001170Acidiphilium cryptumEubacteriaProteobacteriaAerobe
MMDBm0001952Aeropyrum pernixArchaeaCrenarchaeotaAerobe
MMDBm0036241Histoplasma capsulatumFungiAscomycota
MMDBm0036245Histoplasma capsulatumFungiAscomycota
MMDBm0036190Blastomyces dermatitidisFungiAscomycota
MMDBm0001205Alcanivorax borkumensisEubacteriaProteobacteriaAerobe
MMDBm0001212Alkalilimnicola ehrlichiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001222Anaeromyxobacter dehalogenansEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001223Anaeromyxobacter sp. Fw109-5EubacteriaProteobacteriaAnaerobe
MMDBm0001224Anaeromyxobacter sp. KEubacteriaProteobacteriaAnaerobe
MMDBm0001231Aquifex aeolicusEubacteriaAquificaeAerobe
MMDBm0001953Archaeoglobus fulgidusArchaeaEuryarchaeotaAnaerobe
MMDBm0036351Microsporum canisFungiAscomycota
MMDBm0098044Eremothecium gossypiiFungiAscomycota
MMDBm0029014Aspergillus clavatusFungiAscomycota
MMDBm0029023Aspergillus fumigatusFungiAscomycota
MMDBm0029026Aspergillus fumigatusFungiAscomycota
MMDBm0028980Aspergillus oryzaeFungiAscomycota
MMDBm0028995Aspergillus terreusFungiAscomycota
MMDBm0001247Azotobacter vinelandiiEubacteriaProteobacteriaAerobe
MMDBm0001258Bacillus thuringiensisEubacteriaFirmicutesFacultative aerobe
MMDBm0000460Bacillus anthracisEubacteriaFirmicutes
MMDBm0001249Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0000027Bacillus cytotoxicusEubacteriaFirmicutesAerobe
MMDBm0001252Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0001256Bacillus cereusEubacteriaFirmicutesAerobe
MMDBm0001254Bacillus thuringiensisEubacteriaFirmicutesFacultative aerobe
MMDBm0001255Bacillus licheniformisEubacteriaFirmicutesFacultative aerobe
MMDBm0001261Bacillus weihenstephanensisEubacteriaFirmicutesAerobe
MMDBm0001260Bacillus pumilusEubacteriaFirmicutesAerobe
MMDBm0001248Bacillus subtilisEubacteriaFirmicutesFacultative aerobe
MMDBm0001259amyloliquefaciensEubacteriaFirmicutesAerobe
MMDBm0036193Blastomyces gilchristiiFungiAscomycota
MMDBm0050478Botrytis cinereaFungiAscomycota
MMDBm0000221Ochrobactrum anthropiEubacteriaProteobacteriaAerobe
MMDBm0001358Thermoanaerobacter tengcongensisEubacteriaFirmicutesAnaerobe
MMDBm0001994Caldicellulosiruptor saccharolyticusEubacteriaFirmicutesAnaerobe
MMDBm0095324Candida albicansFungiAscomycota
MMDBm0095325Candida albicansFungiAscomycota
MMDBm0095334Candida dubliniensisFungiAscomycota
MMDBm0098246Candida glabrataFungiAscomycota
MMDBm0095372Candida tropicalisFungiAscomycota
MMDBm0001406Carboxydothermus hydrogenoformansEubacteriaFirmicutesAnaerobe
MMDBm0080659Chaetomium globosumFungiAscomycota
MMDBm0001445Chloroflexus aurantiacusEubacteriaChloroflexiAnaerobe
MMDBm0001447Chloroflexus sp. Y-400-flEubacteriaChloroflexi
MMDBm0001438Chlorobium tepidumEubacteriaChlorobiAnaerobe
MMDBm0001647Geobacter bemidjiensisEubacteriaProteobacteriaAnaerobe
MMDBm0001450Citrobacter koseriEubacteriaProteobacteriaFacultatively anaerobe
MMDBm0096754Clavispora lusitaniaeFungiAscomycota
MMDBm0036930Coccidioides posadasiiFungiAscomycota
MMDBm0001509Cyanothece sp. ATCC 51142EubacteriaCyanobacteriaFacultative
MMDBm0001501Cronobacter sakazakiiEubacteriaProteobacteriaAnaerobe
MMDBm0148853Cryptococcus neoformansFungiBasidiomycota
MMDBm0148857Cryptococcus neoformansFungiBasidiomycota
MMDBm0095460Debaryomyces hanseniiFungiAscomycota
MMDBm0001517Dechloromonas aromaticaEubacteriaProteobacteriaFacultative
MMDBm0001518Dehalococcoides mccartyiEubacteriaChloroflexiAnaerobe
MMDBm0001520Dehalococcoides sp. BAV1EubacteriaChloroflexiAnaerobe
MMDBm0001519Dehalococcoides sp. CBDB1EubacteriaChloroflexiAnaerobe
MMDBm0001548Desulfovibrio alaskensisEubacteriaProteobacteriaAnaerobe
MMDBm0509020Desulfatibacillum aliphaticivoransEubacteriaProteobacteria
MMDBm0001382Candidatus Desulforudis audaxviatorEubacteriaFirmicutesAnaerobe
MMDBm0001550Desulfovibrio desulfuricansEubacteriaProteobacteriaAnaerobe
MMDBm0001534Desulfitobacterium hafnienseEubacteriaFirmicutesAnaerobe
MMDBm0001533Desulfitobacterium hafnienseEubacteriaFirmicutesAnaerobe
MMDBm0001538Desulfococcus oleovoransEubacteriaProteobacteriaAnaerobe
MMDBm0001542Desulfotomaculum reducensEubacteriaFirmicutesAnaerobe
MMDBm0001547Desulfovibrio vulgarisEubacteriaProteobacteriaAnaerobe
MMDBm0002010Desulfovibrio vulgarisEubacteriaProteobacteriaAnaerobe
MMDBm0001549Desulfovibrio vulgarisEubacteriaProteobacteriaAnaerobe
MMDBm0001598Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001595Escherichia coliEubacteriaProteobacteriaFacultative anaerobe
MMDBm0029062Aspergillus nidulansFungiAscomycota
MMDBm0001571Enterobacter sp. 638EubacteriaProteobacteriaFacultative anaerobe
MMDBm0001609Exiguobacterium sibiricumEubacteriaFirmicutesFacultative aerobe
MMDBm0001613Fervidobacterium nodosumEubacteriaThermotogaeAnaerobe
MMDBm0064354Fusarium vanetteniiFungiAscomycota
MMDBm0002011Gemmatimonas aurantiacaEubacteriaGemmatimonadetesAerobe
MMDBm0001648Geobacter sp. FRC-32EubacteriaProteobacteriaAnaerobe
MMDBm0001636Geobacillus kaustophilusEubacteriaFirmicutesAerobe
MMDBm0001646Geobacter lovleyiEubacteriaProteobacteriaAnaerobe
MMDBm0001644Geobacter metallireducensEubacteriaProteobacteriaAnaerobe
MMDBm0001968Geobacter sulfurreducensEubacteriaProteobacteriaAnaerobe
MMDBm0001649Geobacter sp. M21EubacteriaProteobacteriaAnaerobe
MMDBm0001638Geobacillus sp. WCH70EubacteriaFirmicutesFacultative anaerobe
MMDBm0001637thermodenitrificansEubacteriaFirmicutesFacultative aerobe
MMDBm0001645Geobacter uraniireducensEubacteriaProteobacteriaMicroaerophilic
MMDBm0001652Gloeobacter violaceusEubacteriaCyanobacteria
MMDBm0001654Gluconobacter oxydansEubacteriaProteobacteriaAerobe
MMDBm0001665Hahella chejuensisEubacteriaProteobacteriaAerobe
MMDBm0001680Halorhodospira halophilaEubacteriaProteobacteriaAnaerobe
MMDBm0001699Heliobacterium modesticaldumEubacteriaFirmicutesAnaerobe
MMDBm0001702Herpetosiphon aurantiacusEubacteriaChloroflexiAerobe
MMDBm0001728Klebsiella pneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001727Klebsiella pneumoniaeEubacteriaProteobacteriaFacultative anaerobe
MMDBm0098142Kluyveromyces lactisFungiAscomycota
MMDBm0097254Komagataella phaffiiFungiAscomycota
MMDBm0001385Candidatus Koribacter versatilisEubacteriaAcidobacteriaAerobe
MMDBm0124269Laccaria bicolorFungiBasidiomycota
MMDBm0098203Lachancea thermotoleransFungiAscomycota
MMDBm0002002Leptospira biflexaEubacteriaSpirochaetesAerobe
MMDBm0001777borgpeterseniiEubacteriaSpirochaetesAerobe
MMDBm0001776borgpeterseniiEubacteriaSpirochaetesAerobe
MMDBm0001999Leptospira biflexaEubacteriaSpirochaetesAerobe
MMDBm0001982Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130EubacteriaSpirochaetesAerobe
MMDBm0001974Leptospira interrogans serovar Lai str. 56601EubacteriaSpirochaetesAerobe
MMDBm0095430Lodderomyces elongisporusFungiAscomycota
MMDBm0001992Magnetococcus marinusEubacteriaProteobacteriaAerobe
MMDBm0001796Magnetospirillum magneticumEubacteriaProteobacteriaMicroaerophilic
MMDBm0001801Marinobacter nauticusEubacteriaProteobacteriaFacultative
MMDBm0001552Desulfovibrio salexigensEubacteriaProteobacteriaAnaerobe
MMDBm0001843Methanosarcina acetivoransArchaeaEuryarchaeotaAnaerobe
MMDBm0001860Methylobacterium chloromethanicumEubacteriaProteobacteriaAerobe
MMDBm0001865Methylococcus capsulatusEubacteriaProteobacteriaAerobe
MMDBm0001818Methanocaldococcus jannaschiiArchaeaEuryarchaeotaAnaerobe
MMDBm0001861Methylobacterium nodulansEubacteriaProteobacteriaAerobe
MMDBm0001859Methylobacterium populiEubacteriaProteobacteriaAerobe
MMDBm0001864Methylocella silvestrisEubacteriaProteobacteriaAerobe
MMDBm0001846Methanosphaera stadtmanaeNot AvailableEuryarchaeotaAnaerobe
MMDBm0001849Methanothermobacter thermautotrophicusArchaeaEuryarchaeotaAnaerobe
MMDBm0881240Microcystis aeruginosaEubacteriaCyanobacteria
MMDBm0001873Microcystis aeruginosaEubacteriaCyanobacteriaAerobe
MMDBm0001924Natranaerobius thermophilusEubacteriaFirmicutesObligate anaerobe
MMDBm0029017Aspergillus fischeriFungiAscomycota
MMDBm0082117Neurospora crassaFungiAscomycota
MMDBm0001942Nitrosococcus oceaniEubacteriaProteobacteriaAerobe
MMDBm0001960Nostoc punctiformeEubacteriaCyanobacteriaAerobe
MMDBm0001959Nostoc sp. PCC 7120EubacteriaCyanobacteriaAerobe
MMDBm0037032Paracoccidioides brasiliensisFungiAscomycota
MMDBm0037031Paracoccidioides brasiliensisFungiAscomycota
MMDBm0000232Parabacteroides distasonisEubacteriaBacteroidetesAnaerobe
MMDBm0002659Synechococcus sp. WH 8102EubacteriaCyanobacteriaFacultative
MMDBm0002347Pectobacterium carotovorumEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002353Pelobacter carbinolicusEubacteriaProteobacteriaAnaerobe
MMDBm0002356Pelotomaculum thermopropionicumEubacteriaFirmicutesAnaerobe
MMDBm0031184Penicillium rubens Wisconsin 54-1255FungiAscomycota
MMDBm0002357Persephonella marinaEubacteriaAquificaeMicroaerophilic
MMDBm0002358Petrotoga mobilisEubacteriaThermotogaeAnaerobe
MMDBm0095709Meyerozyma guilliermondiiFungiAscomycota
MMDBm0095826Scheffersomyces stipitisFungiAscomycota
MMDBm0081377Podospora anserinaFungiAscomycota
MMDBm0136442Postia placentaFungiBasidiomycota
MMDBm0002395Pseudomonas syringaeEubacteriaProteobacteriaAerobe
MMDBm0002404Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0002407Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0002399Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0002391Pseudomonas aeruginosaEubacteriaProteobacteriaAerobe
MMDBm0002398Pseudomonas entomophilaEubacteriaProteobacteriaAerobe
MMDBm0002393Pseudomonas fluorescensEubacteriaProteobacteriaAerobe
MMDBm0002401mendocinaEubacteriaProteobacteriaAerobe
MMDBm0002403Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0002397Pseudomonas fluorescensEubacteriaProteobacteriaAerobe
MMDBm0002405Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0002392Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0002406Pseudomonas putidaEubacteriaProteobacteriaAerobe
MMDBm0002394Pseudomonas syringaeEubacteriaProteobacteriaAerobe
MMDBm0002396Pseudomonas syringaeEubacteriaProteobacteriaAerobe
MMDBm0002400Stutzerimonas stutzeriEubacteriaProteobacteriaAerobe
MMDBm0002423Pyrococcus abyssiArchaeaEuryarchaeotaAnaerobe
MMDBm0002425Pyrococcus furiosusArchaeaEuryarchaeotaAnaerobe
MMDBm0002424Pyrococcus horikoshiiArchaeaEuryarchaeotaAnaerobe
MMDBm0019059Pyrenophora tritici-repentisFungiAscomycota
MMDBm0002538Sinorhizobium melilotiEubacteriaProteobacteriaAerobe
MMDBm0002448Rhodopirellula balticaEubacteriaPlanctomycetesAerobe
MMDBm0002457Rhodospirillum centenumEubacteriaProteobacteriaFacultative anaerobe
MMDBm0001204Rhodoferax ferrireducensEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002456Rhodospirillum rubrumEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002442Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002476Roseiflexus castenholziiEubacteriaChloroflexiAerobe; anaerobe
MMDBm0002475Roseiflexus sp. RS-1EubacteriaChloroflexiAerobe; anaerobe
MMDBm0101569Schizosaccharomyces japonicusFungiAscomycota
MMDBm0101577Schizosaccharomyces pombeFungiAscomycota
MMDBm0050750Sclerotinia sclerotiorumFungiAscomycota
MMDBm0002506Serratia proteamaculansEubacteriaProteobacteriaFacultative
MMDBm0002539Sinorhizobium medicaeEubacteriaProteobacteriaAerobe
MMDBm0001397Candidatus Solibacter usitatusEubacteriaAcidobacteriaAerobe
MMDBm0001997Sorangium cellulosumEubacteriaProteobacteriaAerobe
MMDBm0082238Sordaria macrosporaFungiAscomycota
MMDBm0002581Stenotrophomonas maltophiliaEubacteriaProteobacteriaAerobe
MMDBm0002580Stenotrophomonas maltophiliaEubacteriaProteobacteriaAerobe
MMDBm0002643Sulfolobus acidocaldariusArchaeaCrenarchaeotaAerobe
MMDBm0002654Sulfurimonas denitrificansEubacteriaProteobacteriaAnaerobe
MMDBm0002652Sulfurihydrogenibium sp. YO3AOP1EubacteriaAquificaeFacultative
MMDBm0002658Symbiobacterium thermophilumEubacteriaFirmicutesMicroaerophilic
MMDBm0002672Syntrophus aciditrophicusEubacteriaProteobacteriaAnaerobe
MMDBm0002352Pelobacter carbinolicusEubacteriaProteobacteriaAnaerobe
MMDBm0002663Synechococcus elongatusEubacteriaCyanobacteriaFacultative
MMDBm0002670Syntrophobacter fumaroxidansEubacteriaProteobacteriaAnaerobe
MMDBm0002668Synechococcus sp. PCC 7002EubacteriaCyanobacteriaFacultative
MMDBm0002660Synechococcus elongatusEubacteriaCyanobacteriaAerobe
MMDBm0002661Synechococcus sp. CC9902EubacteriaCyanobacteriaFacultative
MMDBm0002662Synechococcus sp. CC9605EubacteriaCyanobacteriaFacultative
MMDBm0001991Syntrophomonas wolfeiEubacteriaFirmicutesAnaerobe
MMDBm0882069Synechocystis sp. PCC 6803Eubacteria
MMDBm0035698Talaromyces marneffeiFungiAscomycota
MMDBm0035718Talaromyces stipitatusFungiAscomycota
MMDBm0002707Thermosipho africanusEubacteriaThermotogaeAnaerobe
MMDBm0002706Thermosipho melanesiensisEubacteriaThermotogaeAnaerobe
MMDBm0001963Thermotoga maritimaEubacteriaThermotogaeAnaerobe
MMDBm0002713Thermotoga neapolitanaEubacteriaThermotogaeMicroaerophilic
MMDBm0002710Thermotoga petrophilaEubacteriaThermotogaeAnaerobe
MMDBm0002680Thermoanaerobacter pseudethanolicus EubacteriaFirmicutesAnaerobe
MMDBm0002679Thermoanaerobacter sp. X514EubacteriaFirmicutesAnaerobe
MMDBm0002712Thermotoga sp. RQ2EubacteriaThermotogaeAnaerobe
MMDBm0001983Thermus thermophilusEubacteriaDeinococcus-thermusAerobe
MMDBm0001985Thermus thermophilusEubacteriaDeinococcus-thermusAerobe
MMDBm0002709Thermosynechococcus elongatusEubacteriaCyanobacteria
MMDBm0002006Thermodesulfovibrio yellowstoniiEubacteriaNitrospirae
MMDBm0002246Thioalkalivibrio sp. HL-EbGR7EubacteriaProteobacteria
MMDBm0002730Trichodesmium erythraeumEubacteriaCyanobacteriaAerobe
MMDBm0001220Anabaena variabilisEubacteriaCyanobacteriaAerobe
MMDBm0036806Uncinocarpus reesiiFungiAscomycota
MMDBm0098911Vanderwaltozyma polysporaFungiAscomycota
MMDBm0056931Verticillium alfalfaeFungiAscomycota
MMDBm0001972Xanthomonas citriEubacteriaProteobacteriaAerobe
MMDBm0002764Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0002763Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0002766Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0002761Xanthomonas campestrisEubacteriaProteobacteriaAerobe
MMDBm0002765Xanthomonas oryzaeEubacteriaProteobacteriaAerobe
MMDBm0002767Xanthomonas oryzaeEubacteriaProteobacteriaAerobe
MMDBm0002762Xanthomonas oryzaeEubacteriaProteobacteriaAerobe
MMDBm0002774Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002771Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002773Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0002772Xylella fastidiosaEubacteriaProteobacteriaAerobe
MMDBm0096592Yarrowia lipolyticaFungiAscomycota
MMDBm0098376Saccharomyces cerevisiaeFungiAscomycota
MMDBm0098339Saccharomyces cerevisiaeFungiAscomycota
MMDBm0098297Saccharomyces cerevisiaeFungiAscomycota
MMDBm0098571Saccharomyces cerevisiaeFungiAscomycota
MMDBm0098327Saccharomyces cerevisiaeFungiAscomycota
MMDBm0098378Saccharomyces cerevisiaeFungiAscomycota
MMDBm0002781Yersinia enterocoliticaEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002783pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002786pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002784Yersinia pestisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002782Yersinia pestisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002778pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002785pseudotuberculosisEubacteriaProteobacteriaFacultative anaerobe
MMDBm0098957Zygosaccharomyces rouxiiFungiAscomycota
MMDBm0002711Thermotoga lettingaeEubacteriaThermotogaeAnaerobe
MMDBm0002711Thermotoga lettingaeEubacteriaThermotogaeAnaerobe
MMDBm0001950Nocardia farcinicaEubacteriaActinobacteriaAerobe